RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 MAP3K7CLP57077 242 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 GRSF1Q12849 480 aaKnown RBP eCLIP18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 TCERG1LQ5VWI1 586 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 ANKRD40Q6AI12 368 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 ISM2Q6H9L7 571 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 WHAMMQ8TF30 809 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 P2RY13Q9BPV8 354 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 NT5C1AQ9BXI3 368 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 EPC1Q9H2F5 836 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 LINC00597Q9H2U6 94 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 CYP3A43Q9HB55 503 aa18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 FBRSL1Q9HCM7 1045 aaKnown RBP18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 HOOK1Q9UJC3 728 aaKnown RBP18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 CHURC1-FNTBB4DL54 471 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 K7ESF4 209 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 SLC16A3O15427 465 aaKnown RBP18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 COCHO43405 550 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 RNF40O75150 1001 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 CILPO75339 1184 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 NFATC1O95644 943 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 FAM200BP0CF97 657 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 GTF2H1P32780 548 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 FNTBP49356 437 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 AMPD2Q01433 879 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 HEATR6Q6AI08 1181 aaKnown RBP18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 CLEC20AQ6ZU45 233 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 GPRIN1Q7Z2K8 1008 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 FILIP1Q7Z7B0 1213 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 ZC3H3Q8IXZ2 948 aaKnown RBP18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 SYNPOQ8N3V7 929 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 DCLK2Q8N568 766 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 FBXL13Q8NEE6 735 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 OVCA2Q8WZ82 227 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 RUBCNQ92622 972 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 ARID3AQ99856 593 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 CCSER2Q9H7U1 834 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 CSNK1G1Q9HCP0 422 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 CFAP97Q9P2B7 532 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 CHORDC1Q9UHD1 332 aaPredicted RBP18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 MAN1B1Q9UKM7 699 aa18.21■□□□□ 0.51
CDC42BPB-208ENST00000561271 ABCA7Q8IZY2 2146 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 GADD45BO75293 160 aaPredicted RBP18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 PAPSS2O95340 614 aaPredicted RBP18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 CYP17A1P05093 508 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 TRIM21P19474 475 aaKnown RBP18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 PGFP49763 221 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 GALK1P51570 392 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 NRLP54845 237 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 MCCD1P59942 119 aaPredicted RBP18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 CBWD6Q4V339 395 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 ZNF394Q53GI3 561 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 CBWD3Q5JTY5 395 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 CBWD5Q5RIA9 395 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 EZH1Q92800 747 aaPredicted RBP18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 CD101Q93033 1021 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 CYFIP2Q96F07 1278 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 HNRNPABQ99729 332 aaKnown RBP18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 IL37Q9NZH6 218 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 NCDNQ9UBB6 729 aa18.2■□□□□ 0.5
CDC42BPB-208ENST00000561271 TNRC6BQ9UPQ9 1833 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 FAM92AA1XBS5 289 aa18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 PSMA7O14818 248 aa18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 STX10O60499 249 aa18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 CD44P16070 742 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 FKBP3Q00688 224 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 LRRC63Q05C16 580 aa18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 LPAL2Q16609 132 aa18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 HECTD3Q5T447 861 aa18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 KIAA2013Q8IYS2 634 aa18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 ZFRQ96KR1 1074 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 RAB20Q9NX57 234 aa18.19■□□□□ 0.5
CDC42BPB-208ENST00000561271 HHLA1C9JL84 531 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 CYP26A1O43174 497 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 ZDHHC11BP0C7U3 371 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 DRD1P21728 446 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 NR1H3Q13133 447 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 SRSF5Q13243 272 aaKnown RBP18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 STIM1Q13586 685 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 GAB4Q2WGN9 574 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 SNX30Q5VWJ9 437 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 KLHL10Q6JEL2 608 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 PRR23BQ6ZRT6 265 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 DDX42Q86XP3 938 aaKnown RBP eCLIP18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 TATDN2Q93075 761 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 FBXO44Q9H4M3 255 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 CISHQ9NSE2 258 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 POLR3BQ9NW08 1133 aaPredicted RBP18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 COMMD8Q9NX08 183 aa18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 ARMCX3Q9UH62 379 aaPredicted RBP18.18■□□□□ 0.5
CDC42BPB-208ENST00000561271 CACNA1AO00555 2505 aa18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 BIN1O00499 593 aa18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 IRF1P10914 325 aa18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 OPRD1P41143 372 aa18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 TUBP50607 506 aa18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 PPP1R26Q5T8A7 1209 aaPredicted RBP18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 RPLP0P6Q8NHW5 317 aa18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 SLC35C1Q96A29 364 aa18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 EXOC4Q96A65 974 aa18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 GTPBP4Q9BZE4 634 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-208ENST00000561271 NACA2Q9H009 215 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms