RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 WASHC2CQ9Y4E1 1318 aa4.13□□□□□ -1.75
USP8-216ENST00000561206 GCATO75600 419 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 FGAP02671 866 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 THP07101 528 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 XRCC6P12956 609 aaKnown RBP eCLIP4.12□□□□□ -1.75
USP8-216ENST00000561206 PSG6Q00889 435 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 KRT17Q04695 432 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 LY6KQ17RY6 165 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 KRT71Q3SY84 523 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 MGAT5BQ3V5L5 792 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 ZNF585BQ52M93 769 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 DEF8Q6ZN54 512 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 SIRT6Q8N6T7 355 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 PLBD2Q8NHP8 589 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 DNASE2BQ8WZ79 361 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 HSPBAP1Q96EW2 488 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 ERRFI1Q9UJM3 462 aaPredicted RBP4.12□□□□□ -1.75
USP8-216ENST00000561206 AMFRQ9UKV5 643 aa4.12□□□□□ -1.75
USP8-216ENST00000561206 A0A087WWL8 130 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 H3BNX3 289 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 ALDH2P05091 517 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 AKAP5P24588 427 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 HOXD9P28356 352 aaPredicted RBP4.11□□□□□ -1.75
USP8-216ENST00000561206 THBS4P35443 961 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 GHRHRQ02643 423 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 NPNTQ6UXI9 565 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 OSR1Q8TAX0 266 aaPredicted RBP4.11□□□□□ -1.75
USP8-216ENST00000561206 MAP3K14Q99558 947 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 NUP88Q99567 741 aaPredicted RBP4.11□□□□□ -1.75
USP8-216ENST00000561206 LUC7L2Q9Y383 392 aaKnown RBP4.11□□□□□ -1.75
USP8-216ENST00000561206 SQORQ9Y6N5 450 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 ZMYM2Q9UBW7 1377 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 NOTCH2Q04721 2471 aa4.11□□□□□ -1.75
USP8-216ENST00000561206 MYO1CO00159 1063 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 CNOT3O75175 753 aaKnown RBP4.1□□□□□ -1.75
USP8-216ENST00000561206 RNF8O76064 485 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 GKP32189 559 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 ARFIP2P53365 341 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 RAB1AP62820 205 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 MLC1Q15049 377 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 C4orf46Q504U0 113 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 CERCAMQ5T4B2 595 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 DNAJC5GQ8N7S2 189 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 BPIFB1Q8TDL5 484 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 HPS3Q969F9 1004 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 SIGLEC11Q96RL6 698 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 P2RX7Q99572 595 aaKnown RBP4.1□□□□□ -1.75
USP8-216ENST00000561206 CGRRF1Q99675 332 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 C17orf80Q9BSJ5 609 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 TCF7L1Q9HCS4 588 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 CNNM1Q9NRU3 951 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 CPA4Q9UI42 421 aa4.1□□□□□ -1.75
USP8-216ENST00000561206 B4DGG1 531 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 MT-CO3P00414 261 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 IGKV3-20P01619 116 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 PHKG2P15735 406 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 PRKAG1P54619 331 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 SUMO2P61956 95 aaKnown RBP4.09□□□□□ -1.75
USP8-216ENST00000561206 ZXDBP98169 803 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 LMAN2Q12907 356 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 LARS2Q15031 903 aaKnown RBP4.09□□□□□ -1.75
USP8-216ENST00000561206 PLA1AQ53H76 456 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 ATAT1Q5SQI0 421 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 LMBRD2Q68DH5 695 aaPredicted RBP4.09□□□□□ -1.75
USP8-216ENST00000561206 HIST2H2BCQ6DN03 193 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 CUZD1Q86UP6 607 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 PIM3Q86V86 326 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 SLC15A4Q8N697 577 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 LINC01465Q8N7H1 131 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 TMEM171Q8WVE6 324 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 MAP4K1Q92918 833 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 CHMP4CQ96CF2 233 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 TRIM54Q9BYV2 358 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 FAM234AQ9H0X4 552 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 ARMT1Q9H993 441 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 PIH1D1Q9NWS0 290 aaKnown RBP4.09□□□□□ -1.75
USP8-216ENST00000561206 SELENONQ9NZV5 590 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 PI4KBQ9UBF8 816 aa4.09□□□□□ -1.75
USP8-216ENST00000561206 A0A088AWK7 358 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 M0R3H8 397 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 PSMD9O00233 223 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 CES2O00748 559 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 PMPCBO75439 489 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 APEHP13798 732 aaKnown RBP4.08□□□□□ -1.76
USP8-216ENST00000561206 CFHR1Q03591 330 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 AWAT1Q58HT5 328 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 PTCHD4Q6ZW05 846 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 GRAMD1CQ8IYS0 662 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 KBTBD7Q8WVZ9 684 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 C1GALT1C1Q96EU7 318 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 CCDC17Q96LX7 622 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 STAP2Q9UGK3 403 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 SBNO2Q9Y2G9 1366 aa4.08□□□□□ -1.76
USP8-216ENST00000561206 IFITM10A6NMD0 228 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 LACTBL1A8MY62 500 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 TLR2O60603 784 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 CYP19A1P11511 503 aaPredicted RBP4.07□□□□□ -1.76
USP8-216ENST00000561206 NPR1P16066 1061 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 VCAM1P19320 739 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 DIO1P49895 249 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms