RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 GMIPQ9P107 970 aa28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 CNOT1A5YKK6 2376 aaKnown RBP28.72■■■□□ 2.19
SNRPA1-215ENST00000561187 COCHO43405 550 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 AP1G2O75843 785 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 FAM163BP0C2L3 166 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 IRF1P10914 325 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 MPLP40238 635 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 PPP3CCP48454 512 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 ATL3Q6DD88 541 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 PAQR9Q6ZVX9 377 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 KCTD10Q9H3F6 313 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 CCSER2Q9H7U1 834 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 VRTNQ9H8Y1 702 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 DMAP1Q9NPF5 467 aaPredicted RBP28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 FAM49BQ9NUQ9 324 aa28.71■■■□□ 2.19
SNRPA1-215ENST00000561187 RTN3O95197 1032 aaPredicted RBP28.7■■■□□ 2.18
SNRPA1-215ENST00000561187 PRR29P0C7W0 189 aa28.7■■■□□ 2.18
SNRPA1-215ENST00000561187 JAKMIP2Q96AA8 810 aa28.7■■■□□ 2.18
SNRPA1-215ENST00000561187 SMARCD1Q96GM5 515 aa28.7■■■□□ 2.18
SNRPA1-215ENST00000561187 DUSP15Q9H1R2 295 aaPredicted RBP28.7■■■□□ 2.18
SNRPA1-215ENST00000561187 DMAC2Q9NW81 257 aa28.7■■■□□ 2.18
SNRPA1-215ENST00000561187 MYH10P35580 1976 aa28.7■■■□□ 2.18
SNRPA1-215ENST00000561187 PIK3CAP42336 1068 aa28.69■■■□□ 2.18
SNRPA1-215ENST00000561187 CREB5Q02930 508 aa28.69■■■□□ 2.18
SNRPA1-215ENST00000561187 IL31Q6EBC2 164 aa28.69■■■□□ 2.18
SNRPA1-215ENST00000561187 FUKQ8N0W3 1084 aa28.69■■■□□ 2.18
SNRPA1-215ENST00000561187 LOXL4Q96JB6 756 aa28.69■■■□□ 2.18
SNRPA1-215ENST00000561187 TNIP3Q96KP6 325 aa28.69■■■□□ 2.18
SNRPA1-215ENST00000561187 CIZ1Q9ULV3 898 aaPredicted RBP28.69■■■□□ 2.18
SNRPA1-215ENST00000561187 LAMA1P25391 3075 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 SLC9A3R1O14745 358 aaPredicted RBP28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 AKAP3O75969 853 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 ZNF806P0C7X5 589 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 ADH5P11766 374 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 PDIA4P13667 645 aaKnown RBP28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 ADORA2BP29275 332 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 TIE1P35590 1138 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 NDST1P52848 882 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 AP3M2P53677 418 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 ELF2Q15723 593 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 RHBDF2Q6PJF5 856 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 ADGRG2Q8IZP9 1017 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 ALLCQ8N6M5 410 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 PDZD8Q8NEN9 1154 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 SLC2A14Q8TDB8 520 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 WBP2Q969T9 261 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 ZFRQ96KR1 1074 aaKnown RBP28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 SPATA32Q96LK8 384 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 NACA2Q9H009 215 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 MMRN2Q9H8L6 949 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 ACACBO00763 2458 aa28.68■■■□□ 2.18
SNRPA1-215ENST00000561187 ABCA7Q8IZY2 2146 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 BEST1O76090 585 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 RPN1P04843 607 aaKnown RBP28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 TRIM49P0CI25 452 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 TRIM49CP0CI26 452 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 PGFP49763 221 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 CLDN10P78369 228 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 LY6G5CQ5SRR4 150 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 HECTD3Q5T447 861 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 DDX42Q86XP3 938 aaKnown RBP eCLIP28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 C12orf29Q8N999 325 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 ZMIZ2Q8NF64 920 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 SMOQ99835 787 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 MAPK8IP1Q9UQF2 711 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 SH3BP1Q9Y3L3 701 aa28.67■■■□□ 2.18
SNRPA1-215ENST00000561187 TNFRSF10BO14763 440 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 KLF8O95600 359 aaPredicted RBP28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 ADH1CP00326 375 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 HLA-DRAP01903 254 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 HNRNPLP14866 589 aaKnown RBP eCLIP28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 MAP3K7CLP57077 242 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 ZACNQ401N2 412 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 EMC10Q5UCC4 262 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 SV2AQ7L0J3 742 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 SLC9A9Q8IVB4 645 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 NAT16Q8N8M0 369 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 MDGA1Q8NFP4 955 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 ZC3H10Q96K80 434 aaKnown RBP28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 PNKPQ96T60 521 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 ARHGEF4Q9NR80 690 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 EBF1Q9UH73 591 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 MMP17Q9ULZ9 603 aa28.66■■■□□ 2.18
SNRPA1-215ENST00000561187 PDXKO00764 312 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 KAT7O95251 611 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 APODP05090 189 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 ADRB1P08588 477 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 P4HA1P13674 534 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 BCKDHBP21953 392 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 CMA1P23946 247 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 ASPAP45381 313 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 C1orf220Q5T0J3 134 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 BBS7Q8IWZ6 715 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 TXNDC5Q8NBS9 432 aaKnown RBP28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 OVCA2Q8WZ82 227 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 FRMD4BQ9Y2L6 1034 aa28.65■■■□□ 2.18
SNRPA1-215ENST00000561187 EPG5Q9HCE0 2579 aa28.64■■■□□ 2.18
SNRPA1-215ENST00000561187 FOXD2O60548 495 aaPredicted RBP28.64■■■□□ 2.18
SNRPA1-215ENST00000561187 SYKP43405 635 aa28.64■■■□□ 2.18
SNRPA1-215ENST00000561187 NDUFA8P51970 172 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms