RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 ZACNQ401N2 412 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 METTL24Q5JXM2 366 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 MFSD4BQ5TF39 518 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 GALNT17Q6IS24 598 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 CEP85Q6P2H3 762 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 BTNL9Q6UXG8 535 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 RFX8Q6ZV50 586 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 TMC6Q7Z403 805 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 TMTC1Q8IUR5 882 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 ATG16L2Q8NAA4 619 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 PHOSPHO1Q8TCT1 267 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 MGARPQ8TDB4 240 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 BORCS6Q96GS4 357 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 FOXB1Q99853 325 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 SORBS1Q9BX66 1292 aaKnown RBP6.68□□□□□ -1.34
USP8-210ENST00000560379 COA1Q9GZY4 146 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 KIAA1683Q9H0B3 1180 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 WASH6PQ9NQA3 447 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 ZBTB40Q9NUA8 1239 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 LMBRD1Q9NUN5 540 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 PIH1D1Q9NWS0 290 aaKnown RBP6.68□□□□□ -1.34
USP8-210ENST00000560379 HOXC10Q9NYD6 342 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.68□□□□□ -1.34
USP8-210ENST00000560379 LRFN1Q9P244 771 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 RABL2AQ9UBK7 228 aaPredicted RBP6.68□□□□□ -1.34
USP8-210ENST00000560379 DENND2AQ9ULE3 1009 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 JAG2Q9Y219 1238 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 MYO3BQ8WXR4 1341 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 ZNF541Q9H0D2 1346 aa6.68□□□□□ -1.34
USP8-210ENST00000560379 A0A1W2PPC4 97 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 A0A1W2PQ45 241 aaPredicted RBP6.67□□□□□ -1.34
USP8-210ENST00000560379 A0A1W2PQY0 241 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 ISM1B1AKI9 464 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 B4DLN1 442 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 H7C0S8 307 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 ECE2O60344 883 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 PLA2G6O60733 806 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 PDE8BO95263 885 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 ZGLP1P0C6A0 271 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 TACR1P25103 407 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 CD86P42081 329 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 NPTX2P47972 431 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 PDE6CP51160 858 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 MRPS35P82673 323 aaKnown RBP6.67□□□□□ -1.34
USP8-210ENST00000560379 PPP3CAQ08209 521 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 SCARB2Q14108 478 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 SPARCL1Q14515 664 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 PLS1Q14651 629 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 TNIP1Q15025 636 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 FAM205BPQ63HN1 556 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 TATDN1Q6P1N9 297 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 USP51Q70EK9 711 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 ZNF804AQ7Z570 1209 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 SLCO6A1Q86UG4 719 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 IQCA1Q86XH1 822 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 VSIG1Q86XK7 387 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 TRIM48Q8IWZ4 208 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 RPAP2Q8IXW5 612 aaPredicted RBP6.67□□□□□ -1.34
USP8-210ENST00000560379 GLB1L3Q8NCI6 653 aaPredicted RBP6.67□□□□□ -1.34
USP8-210ENST00000560379 C3orf20Q8ND61 904 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 GAB3Q8WWW8 586 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 ZNF566Q969W8 418 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 MAP6Q96JE9 813 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 HHIPL1Q96JK4 782 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 NCAPGQ9BPX3 1015 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 POLR3CQ9BUI4 534 aaPredicted RBP6.67□□□□□ -1.34
USP8-210ENST00000560379 EPB41L4AQ9HCS5 686 aaPredicted RBP6.67□□□□□ -1.34
USP8-210ENST00000560379 VPS45Q9NRW7 570 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 GGA3Q9NZ52 723 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 MTRRQ9UBK8 725 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.67□□□□□ -1.34
USP8-210ENST00000560379 PCDHB4Q9Y5E5 795 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 PCDHA3Q9Y5H8 950 aa6.67□□□□□ -1.34
USP8-210ENST00000560379 PDS5AQ29RF7 1337 aaKnown RBP6.67□□□□□ -1.34
USP8-210ENST00000560379 PNMA6EA0A0J9YXQ4 647 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 A0A1W2PQ27 194 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 A0A1W2PQ64 194 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 A0A1W2PQC6 194 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 A0A1W2PQD8 194 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 GOLGA6L3A6NEY3 463 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 MPHOSPH10O00566 681 aaKnown RBP6.66□□□□□ -1.34
USP8-210ENST00000560379 RRP9O43818 475 aaKnown RBP6.66□□□□□ -1.34
USP8-210ENST00000560379 B3GALNT1O75752 331 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 FGFR2P21802 821 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 EEF1GP26641 437 aaKnown RBP6.66□□□□□ -1.34
USP8-210ENST00000560379 AOAHP28039 575 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 SLC6A11P48066 632 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 SUMO3P55854 103 aaPredicted RBP6.66□□□□□ -1.34
USP8-210ENST00000560379 KRTAP10-2P60368 255 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 FKBP1AP62942 108 aaKnown RBP6.66□□□□□ -1.34
USP8-210ENST00000560379 ATP8B2P98198 1209 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 MGAT2Q10469 447 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 NOLC1Q14978 699 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP8-210ENST00000560379 NOMO1Q15155 1222 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 CFAP58Q5T655 872 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 CCBE1Q6UXH8 406 aaPredicted RBP6.66□□□□□ -1.34
USP8-210ENST00000560379 GAREM2Q75VX8 874 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 BTN2A1Q7KYR7 527 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 ATG9AQ7Z3C6 839 aa6.66□□□□□ -1.34
USP8-210ENST00000560379 HEATR3Q7Z4Q2 680 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms