RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 FGF19O95750 216 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 USP17L7P0C7H9 530 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 ZDHHC11BP0C7U3 371 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 SKILP12757 684 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 LCP1P13796 627 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 ZP2Q05996 745 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 PTPN20Q4JDL3 420 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 CLEC4CQ8WTT0 213 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 STK32AQ8WU08 396 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 MCRS1Q96EZ8 462 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 RPGRIP1Q96KN7 1286 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 CPXM1Q96SM3 734 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 AGPAT1Q99943 283 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 FBXO44Q9H4M3 255 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 HAUS4Q9H6D7 363 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 NMUR1Q9HB89 426 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 LRRC4Q9HBW1 653 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 CDH7Q9ULB5 785 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 NCANO14594 1321 aa22.93■■□□□ 1.26
SNX1-210ENST00000560260 E5RJQ4 531 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 MFAP3LO75121 409 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 ADCY5O95622 1261 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 CYP1A1P04798 512 aaPredicted RBP22.92■■□□□ 1.26
SNX1-210ENST00000560260 GBP2P32456 591 aaPredicted RBP22.92■■□□□ 1.26
SNX1-210ENST00000560260 ARID5BQ14865 1188 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 GPR158Q5T848 1215 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 NAA35Q5VZE5 725 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 TXNDC8Q6A555 127 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 CCDC186Q7Z3E2 898 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 ZNF571Q7Z3V5 609 aaPredicted RBP22.92■■□□□ 1.26
SNX1-210ENST00000560260 SCD5Q86SK9 330 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 SYN2Q92777 582 aaPredicted RBP22.92■■□□□ 1.26
SNX1-210ENST00000560260 SLITRK1Q96PX8 696 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 GCNAQ96QF7 691 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 PDCL3Q9H2J4 239 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 ST7Q9NRC1 585 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 OSER1Q9NX31 292 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 EHD2Q9NZN4 543 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 CHORDC1Q9UHD1 332 aaPredicted RBP22.92■■□□□ 1.26
SNX1-210ENST00000560260 USTQ9Y2C2 406 aa22.92■■□□□ 1.26
SNX1-210ENST00000560260 C2orf78A6NCI8 922 aa22.91■■□□□ 1.26
SNX1-210ENST00000560260 SLC34A2O95436 690 aa22.91■■□□□ 1.26
SNX1-210ENST00000560260 ADKP55263 362 aaKnown RBP22.91■■□□□ 1.26
SNX1-210ENST00000560260 PM20D1Q6GTS8 502 aa22.91■■□□□ 1.26
SNX1-210ENST00000560260 ADHFE1Q8IWW8 467 aa22.91■■□□□ 1.26
SNX1-210ENST00000560260 TDRD5Q8NAT2 981 aaKnown RBP22.91■■□□□ 1.26
SNX1-210ENST00000560260 TMEM35BQ8NCS4 154 aa22.91■■□□□ 1.26
SNX1-210ENST00000560260 ZNF397Q8NF99 534 aaPredicted RBP22.91■■□□□ 1.26
SNX1-210ENST00000560260 ST13P5Q8NFI4 369 aaPredicted RBP22.91■■□□□ 1.26
SNX1-210ENST00000560260 OVCA2Q8WZ82 227 aa22.91■■□□□ 1.26
SNX1-210ENST00000560260 SLC22A12Q96S37 553 aa22.91■■□□□ 1.26
SNX1-210ENST00000560260 DNAJC7Q99615 494 aa22.91■■□□□ 1.26
SNX1-210ENST00000560260 TRPM5Q9NZQ8 1165 aa22.91■■□□□ 1.26
SNX1-210ENST00000560260 A0A1W2PQH9 124 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 LOC730098B7Z3J9 87 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 PAPSS1O43252 624 aaPredicted RBP22.9■■□□□ 1.26
SNX1-210ENST00000560260 LSM8O95777 96 aaKnown RBP22.9■■□□□ 1.26
SNX1-210ENST00000560260 ZBED1O96006 694 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 ERBB2P04626 1255 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 PLEKP08567 350 aaPredicted RBP22.9■■□□□ 1.26
SNX1-210ENST00000560260 CCDC172P0C7W6 258 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 VCANP13611 3396 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 HNRNPH3P31942 346 aaKnown RBP22.9■■□□□ 1.26
SNX1-210ENST00000560260 DAOAP59103 153 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 KLHL30Q0D2K2 578 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 OTOP3Q7RTS5 596 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 TMEM110Q86TL2 294 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 FMNL3Q8IVF7 1028 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 SIX6OS1Q8N1H7 587 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 PDZD8Q8NEN9 1154 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 NUP210Q8TEM1 1887 aaPredicted RBP22.9■■□□□ 1.26
SNX1-210ENST00000560260 CPA5Q8WXQ8 436 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 MRPS31Q92665 395 aaKnown RBP22.9■■□□□ 1.26
SNX1-210ENST00000560260 PIWIL1Q96J94 861 aaKnown RBP22.9■■□□□ 1.26
SNX1-210ENST00000560260 SLC46A2Q9BY10 475 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 MIS12Q9H081 205 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 NUCKS1Q9H1E3 243 aaKnown RBP22.9■■□□□ 1.26
SNX1-210ENST00000560260 TASP1Q9H6P5 420 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 GRPEL1Q9HAV7 217 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.9■■□□□ 1.26
SNX1-210ENST00000560260 EPS15L1Q9UBC2 864 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 CEP83Q9Y592 693 aa22.9■■□□□ 1.26
SNX1-210ENST00000560260 UNGP13051 313 aaPredicted RBP22.89■■□□□ 1.26
SNX1-210ENST00000560260 LAMP2P13473 410 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 FCARP24071 287 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 CLEC16AQ2KHT3 1053 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 SNX30Q5VWJ9 437 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 WDR59Q6PJI9 974 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 HFE2Q6ZVN8 426 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 MON1AQ86VX9 555 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 SCML4Q8N228 414 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 MAB21L3Q8N8X9 362 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 PPP1R13BQ96KQ4 1090 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 NECAB3Q96P71 396 aaPredicted RBP22.89■■□□□ 1.26
SNX1-210ENST00000560260 CYLDQ9NQC7 956 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 CNGB3Q9NQW8 809 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 ABHD10Q9NUJ1 306 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 ARHGAP20Q9P2F6 1191 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 PRKAG3Q9UGI9 489 aa22.89■■□□□ 1.26
SNX1-210ENST00000560260 YJEFN3A6XGL0 299 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms