RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ITIH6Q6UXX5 1313 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 TGFB1I1O43294 461 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 F11P03951 625 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 CYP11A1P05108 521 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 HAPLN1P10915 354 aaPredicted RBP21.86■■□□□ 1.09
PSEN1-225ENST00000560005 DDX6P26196 483 aaKnown RBP eCLIP21.86■■□□□ 1.09
PSEN1-225ENST00000560005 USP39Q53GS9 565 aaKnown RBP21.86■■□□□ 1.09
PSEN1-225ENST00000560005 C9orf57Q5W0N0 161 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 CCDC186Q7Z3E2 898 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 CYP2U1Q7Z449 544 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 LRRTM3Q86VH5 581 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 CPA6Q8N4T0 437 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 TSTD1Q8NFU3 115 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 CD101Q93033 1021 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 FAM212AQ96EL1 285 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 ECT2Q9H8V3 914 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 RPF1Q9H9Y2 349 aaKnown RBP21.86■■□□□ 1.09
PSEN1-225ENST00000560005 ABI2Q9NYB9 513 aaPredicted RBP21.86■■□□□ 1.09
PSEN1-225ENST00000560005 LHX6Q9UPM6 363 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 FRMD4BQ9Y2L6 1034 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 THADAQ6YHU6 1953 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 ITPR1Q14643 2758 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 ASCC3Q8N3C0 2202 aaKnown RBP21.86■■□□□ 1.09
PSEN1-225ENST00000560005 MYO16Q9Y6X6 1858 aa21.86■■□□□ 1.09
PSEN1-225ENST00000560005 LAMA5O15230 3695 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 FAM189A1O60320 539 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 HMGA1P17096 107 aaKnown RBP21.85■■□□□ 1.09
PSEN1-225ENST00000560005 BCKDHBP21953 392 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 PSMC2P35998 433 aaKnown RBP21.85■■□□□ 1.09
PSEN1-225ENST00000560005 IRX4P78413 519 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 UBXN1Q04323 297 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 MTF1Q14872 753 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 JADE1Q6IE81 842 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 C11orf74Q86VG3 221 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 STKLD1Q8NE28 680 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 TTC16Q8NEE8 873 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 SPPL2BQ8TCT7 592 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 C2orf15Q8WU43 125 aaKnown RBP21.85■■□□□ 1.09
PSEN1-225ENST00000560005 MRPS31Q92665 395 aaKnown RBP21.85■■□□□ 1.09
PSEN1-225ENST00000560005 ARMCX3Q9UH62 379 aaPredicted RBP21.85■■□□□ 1.09
PSEN1-225ENST00000560005 KIAA1549LQ6ZVL6 1849 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 FREM2Q5SZK8 3169 aa21.85■■□□□ 1.09
PSEN1-225ENST00000560005 CACNA1EQ15878 2313 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 OBSL1O75147 1896 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 PES1O00541 588 aaKnown RBP21.84■■□□□ 1.09
PSEN1-225ENST00000560005 PIRO00625 290 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 KIAA0391O15091 583 aaKnown RBP21.84■■□□□ 1.09
PSEN1-225ENST00000560005 HYAL3O43820 417 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-225ENST00000560005 PAX3P23760 479 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 LIG4P49917 911 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 KYAT1Q16773 422 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 VWA3BQ502W6 1294 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 MON1AQ86VX9 555 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 METTL23Q86XA0 190 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 TSPAN18Q96SJ8 248 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 NUP58Q9BVL2 599 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 AGPAT3Q9NRZ7 376 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 DMAC2Q9NW81 257 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 DSEQ9UL01 958 aa21.84■■□□□ 1.09
PSEN1-225ENST00000560005 MAGED2Q9UNF1 606 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-225ENST00000560005 MAPK13O15264 365 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 OGTO15294 1046 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 ADRB2P07550 413 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 NFICP08651 508 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 PBX1P40424 430 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 DHPSP49366 369 aaPredicted RBP21.83■■□□□ 1.09
PSEN1-225ENST00000560005 ZNF268Q14587 947 aaPredicted RBP21.83■■□□□ 1.09
PSEN1-225ENST00000560005 ANO7Q6IWH7 933 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 THEM5Q8N1Q8 247 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 OSCP1Q8WVF1 389 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 PIGKQ92643 395 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 NDST4Q9H3R1 872 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 INTS13Q9NVM9 706 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 DUS2Q9NX74 493 aaKnown RBP21.83■■□□□ 1.09
PSEN1-225ENST00000560005 NEUROG3Q9Y4Z2 214 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.83■■□□□ 1.09
PSEN1-225ENST00000560005 WNT6Q9Y6F9 365 aa21.83■■□□□ 1.09
PSEN1-225ENST00000560005 SCN1AP35498 2009 aa21.82■■□□□ 1.08
PSEN1-225ENST00000560005 SOBPA7XYQ1 873 aa21.82■■□□□ 1.08
PSEN1-225ENST00000560005 CYB561D2O14569 222 aa21.82■■□□□ 1.08
PSEN1-225ENST00000560005 HNRNPDLO14979 420 aaKnown RBP21.82■■□□□ 1.08
PSEN1-225ENST00000560005 IFNAR2P48551 515 aa21.82■■□□□ 1.08
PSEN1-225ENST00000560005 GPR15P49685 360 aa21.82■■□□□ 1.08
PSEN1-225ENST00000560005 KCNA1Q09470 495 aa21.82■■□□□ 1.08
PSEN1-225ENST00000560005 SMARCB1Q12824 385 aa21.82■■□□□ 1.08
PSEN1-225ENST00000560005 TRIM59Q8IWR1 403 aa21.82■■□□□ 1.08
PSEN1-225ENST00000560005 ANO9A1A5B4 782 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 CLIC2O15247 247 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 TEX33O43247 280 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 GARTP22102 1010 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 TMEM132DQ14C87 1099 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 ZNF77Q15935 545 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 SDHAF4Q5VUM1 108 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 WSCD1Q658N2 575 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 CEP135Q66GS9 1140 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 SLFN12LQ6IEE8 588 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 ZSCAN30Q86W11 494 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 RASSF3Q86WH2 238 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 ATP2A3Q93084 1043 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 ERGIC2Q96RQ1 377 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms