RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 TIGD1Q96MW7 591 aa21.68■■□□□ 1.06
CHRNA3-207ENST00000559941 TWNKQ96RR1 684 aa21.68■■□□□ 1.06
CHRNA3-207ENST00000559941 FAM49BQ9NUQ9 324 aa21.68■■□□□ 1.06
CHRNA3-207ENST00000559941 RNF40O75150 1001 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 BEST1O76090 585 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 SMC2O95347 1197 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 ZDHHC11BP0C7U3 371 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 EPB41P11171 864 aaKnown RBP21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 MBL2P11226 248 aaPredicted RBP21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 CNR2P34972 360 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 FBXO43Q4G163 708 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 DDX42Q86XP3 938 aaKnown RBP eCLIP21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 CCDC150Q8NCX0 1101 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 SECISBP2LQ93073 1101 aaKnown RBP21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 EEF2KMTQ96G04 330 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 HNRNPABQ99729 332 aaKnown RBP21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 NT5C1AQ9BXI3 368 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 NIF3L1Q9GZT8 377 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 SMPD4Q9NXE4 827 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 PCDHA5Q9Y5H7 936 aa21.67■■□□□ 1.06
CHRNA3-207ENST00000559941 SPAG17Q6Q759 2223 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 SLC9A3R1O14745 358 aaPredicted RBP21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 STX10O60499 249 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 CILPO75339 1184 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 FAM200BP0CF97 657 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 ID4P47928 161 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 MAP3K7CLP57077 242 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 HECTD3Q5T447 861 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 FILIP1Q7Z7B0 1213 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 ZC3H3Q8IXZ2 948 aaKnown RBP21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 ADGRG2Q8IZP9 1017 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 WHAMMQ8TF30 809 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 SMARCE1Q969G3 411 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 FAXDC2Q96IV6 333 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 GTPBP4Q9BZE4 634 aaKnown RBP21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 RAB23Q9ULC3 237 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 RALGAPA1Q6GYQ0 2036 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 DMXL1Q9Y485 3027 aa21.66■■□□□ 1.06
CHRNA3-207ENST00000559941 COCHO43405 550 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 HRO43593 1189 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 ADORA2BP29275 332 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 HOXC13P31276 330 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 MXI1P50539 228 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 TUBP50607 506 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 HEATR6Q6AI08 1181 aaKnown RBP21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 WDR5BQ86VZ2 330 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 GPR161Q8N6U8 529 aaKnown RBP21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 EZH1Q92800 747 aaPredicted RBP21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 SEMA4DQ92854 862 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 ERCC4Q92889 916 aaPredicted RBP21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 CYFIP2Q96F07 1278 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 TSG101Q99816 390 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 FBXO44Q9H4M3 255 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 GMIPQ9P107 970 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 CFAP97Q9P2B7 532 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 HOOK1Q9UJC3 728 aaKnown RBP21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 EML5Q05BV3 1969 aa21.65■■□□□ 1.06
CHRNA3-207ENST00000559941 SLC16A3O15427 465 aaKnown RBP21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 CYP17A1P05093 508 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 CD58P19256 250 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 FKBP3Q00688 224 aaKnown RBP21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 GAB4Q2WGN9 574 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 ANKRD40Q6AI12 368 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 CLEC20AQ6ZU45 233 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 ELOA2Q8IYF1 753 aaPredicted RBP21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 FBXL13Q8NEE6 735 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 ZFRQ96KR1 1074 aaKnown RBP21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 DNAI2Q9GZS0 605 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 CCSER2Q9H7U1 834 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 RAB20Q9NX57 234 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 GMEB2Q9UKD1 530 aa21.64■■□□□ 1.05
CHRNA3-207ENST00000559941 DCHS1Q96JQ0 3298 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 CCDC163A0A0D9SF12 145 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 E2F8A0AVK6 867 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 OPRD1P41143 372 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 PMS1P54277 932 aaKnown RBP21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 SIM2Q14190 667 aaPredicted RBP21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 DHCR24Q15392 516 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 LAIR1Q6GTX8 287 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 TTC39CQ8N584 583 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 PNPLA8Q9NP80 782 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 TBC1D14Q9P2M4 693 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 SLC8A2Q9UPR5 921 aa21.63■■□□□ 1.05
CHRNA3-207ENST00000559941 HHLA1C9JL84 531 aa21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 LRRC63Q05C16 580 aa21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 SRSF5Q13243 272 aaKnown RBP21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 LPAL2Q16609 132 aa21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 RHBDF2Q6PJF5 856 aa21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 PRR23BQ6ZRT6 265 aa21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 GPRIN1Q7Z2K8 1008 aa21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 CAMKK1Q8N5S9 505 aa21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 RPLP0P6Q8NHW5 317 aa21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 TLR8Q9NR97 1041 aaKnown RBP21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 SCML2Q9UQR0 700 aa21.62■■□□□ 1.05
CHRNA3-207ENST00000559941 SCAMP3O14828 347 aaKnown RBP21.61■■□□□ 1.05
CHRNA3-207ENST00000559941 PGFP49763 221 aa21.61■■□□□ 1.05
CHRNA3-207ENST00000559941 TCERG1LQ5VWI1 586 aa21.61■■□□□ 1.05
CHRNA3-207ENST00000559941 CCDC26Q8TAB7 109 aa21.61■■□□□ 1.05
CHRNA3-207ENST00000559941 RMDN1Q96DB5 314 aa21.61■■□□□ 1.05
CHRNA3-207ENST00000559941 OTUB2Q96DC9 234 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms