RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 KLHL38Q2WGJ6 581 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 PPP1R26Q5T8A7 1209 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-216ENST00000559819 ZNF449Q6P9G9 518 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 RGS9BPQ6ZS82 235 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 PRPF39Q86UA1 669 aaKnown RBP10.48□□□□□ -0.73
LRRC28-216ENST00000559819 VSIG1Q86XK7 387 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 AFG1LQ8WV93 481 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 PTPRN2Q92932 1015 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 FAF2Q96CS3 445 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 KIF12Q96FN5 646 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 SERAC1Q96JX3 654 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 MRPL45Q9BRJ2 306 aaKnown RBP10.48□□□□□ -0.73
LRRC28-216ENST00000559819 CNPY3Q9BT09 278 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 CYP3A43Q9HB55 503 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 NGRNQ9NPE2 291 aaKnown RBP10.48□□□□□ -0.73
LRRC28-216ENST00000559819 HEY1Q9Y5J3 304 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 USH1CQ9Y6N9 552 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 NUMBLQ9Y6R0 609 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 SPDYE5A6NIY4 337 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 NDC80O14777 642 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 KCNN4O15554 427 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 PRPSAP2O60256 369 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 TSPAN1O60635 241 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 ENDOD1O94919 500 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 TFE3P19532 575 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-216ENST00000559819 IL4RP24394 825 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 GBP2P32456 591 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-216ENST00000559819 PCK1P35558 622 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 CCDC15Q0P6D6 951 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 KCNJ11Q14654 390 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 SEPT7Q16181 437 aaKnown RBP10.48□□□□□ -0.73
LRRC28-216ENST00000559819 FAM187BQ17R55 369 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 KBTBD12Q3ZCT8 623 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 ZNF484Q5JVG2 852 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 PMF1Q6P1K2 205 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 ACOT1Q86TX2 421 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 TTC30AQ86WT1 665 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 ZNF276Q8N554 614 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 LINC01465Q8N7H1 131 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 BANPQ8N9N5 519 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-216ENST00000559819 OPTNQ96CV9 577 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 RNF157Q96PX1 679 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 GBA2Q9HCG7 927 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-216ENST00000559819 RAB6BQ9NRW1 208 aa10.48□□□□□ -0.73
LRRC28-216ENST00000559819 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-216ENST00000559819 TCRBV9S1A1TA0A576 114 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 CXCL11O14625 94 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 P4HA1P13674 534 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 RBL1P28749 1068 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 SLC8A1P32418 973 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 MAP2K2P36507 400 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 ATXN1P54253 815 aaKnown RBP10.47□□□□□ -0.73
LRRC28-216ENST00000559819 YARSP54577 528 aaKnown RBP10.47□□□□□ -0.73
LRRC28-216ENST00000559819 TMEM62Q0P6H9 643 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 PTK7Q13308 1070 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 RIPK1Q13546 671 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 SETDB1Q15047 1291 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 RASA2Q15283 850 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 PLEKHG4Q58EX7 1191 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 LCLAT1Q6UWP7 414 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 PQLC3Q8N755 202 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 GPATCH11Q8N954 259 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 RFWD2Q8NHY2 731 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 TRIM56Q9BRZ2 755 aaKnown RBP10.47□□□□□ -0.73
LRRC28-216ENST00000559819 B3GNT5Q9BYG0 378 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 NFKBIZQ9BYH8 718 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 ASB7Q9H672 318 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 VRTNQ9H8Y1 702 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 ADARB2Q9NS39 739 aaKnown RBP10.47□□□□□ -0.73
LRRC28-216ENST00000559819 KANSL3Q9P2N6 904 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 DCTN4Q9UJW0 460 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 GABBR2O75899 941 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 ZWINTO95229 277 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 CBX6O95503 412 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 RPSAP08865 295 aaKnown RBP10.47□□□□□ -0.73
LRRC28-216ENST00000559819 ALADP13716 330 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 EZRP15311 586 aaKnown RBP10.47□□□□□ -0.73
LRRC28-216ENST00000559819 ADCYAP1R1P41586 468 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 RBP5P82980 135 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 INCA1Q0VD86 236 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 TAPT1Q6NXT6 567 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 MAMDC4Q6UXC1 1216 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 SCUBE3Q8IX30 993 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 PLD5Q8N7P1 536 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 PCDH19Q8TAB3 1148 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 FAM172AQ8WUF8 416 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 CDCA5Q96FF9 252 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 ACAP3Q96P50 834 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 LRRC37BQ96QE4 947 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 NT5C1AQ9BXI3 368 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 MIS12Q9H081 205 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 PPCSQ9HAB8 311 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 USP29Q9HBJ7 922 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 CYLDQ9NQC7 956 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 GINS2Q9Y248 185 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 TEX264Q9Y6I9 313 aa10.47□□□□□ -0.73
LRRC28-216ENST00000559819 MT-ND3P03897 115 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 T-ENOLP0DO92 83 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 YWHAZP63104 245 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms