RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 PFKLP17858 780 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 ATICP31939 592 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 SLC6A11P48066 632 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 PDE6CP51160 858 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 DLG4P78352 724 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 BIRC3Q13489 604 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 DHCR24Q15392 516 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 AASDHQ4L235 1098 aaPredicted RBP12.37□□□□□ -0.43
USP3-214ENST00000559718 C2orf27AQ580R0 203 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 PLA2G2CQ5R387 149 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 PAQR9Q6ZVX9 377 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 C12orf40Q86WS4 652 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 PLPP6Q8IY26 295 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 ADGRG2Q8IZP9 1017 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 CCDC33Q8N5R6 958 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 PARD3BQ8TEW8 1205 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 USP33Q8TEY7 942 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
USP3-214ENST00000559718 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 ACDQ96AP0 544 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 PAGE5Q96GU1 130 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 ZC3H10Q96K80 434 aaKnown RBP12.37□□□□□ -0.43
USP3-214ENST00000559718 DUSP15Q9H1R2 295 aaPredicted RBP12.37□□□□□ -0.43
USP3-214ENST00000559718 CFAP97Q9P2B7 532 aa12.37□□□□□ -0.43
USP3-214ENST00000559718 CGNQ9P2M7 1197 aaKnown RBP12.37□□□□□ -0.43
USP3-214ENST00000559718 CHORDC1Q9UHD1 332 aaPredicted RBP12.37□□□□□ -0.43
USP3-214ENST00000559718 COCHO43405 550 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 AKAP3O75969 853 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 CLSTN1O94985 981 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 HSP90AA1P07900 732 aaKnown RBP12.36□□□□□ -0.43
USP3-214ENST00000559718 ADRB1P08588 477 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 MBL2P11226 248 aaPredicted RBP12.36□□□□□ -0.43
USP3-214ENST00000559718 YWHAQP27348 245 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 MPLP40238 635 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 PPP3CCP48454 512 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 DGKEP52429 567 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 ORC1Q13415 861 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 NCOA4Q13772 614 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 ZNF699Q32M78 642 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 TCEAL6Q6IPX3 200 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 RHBDF2Q6PJF5 856 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 FAM35AQ86V20 835 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 HSCBQ8IWL3 235 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 CEP57L1Q8IYX8 460 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 C12orf50Q8NA57 414 aaPredicted RBP12.36□□□□□ -0.43
USP3-214ENST00000559718 TCEAL3Q969E4 200 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 FBXO32Q969P5 355 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 SLITRK1Q96PX8 696 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 MED10Q9BTT4 135 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 TPSD1Q9BZJ3 242 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 KCTD10Q9H3F6 313 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 VRTNQ9H8Y1 702 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 EHD2Q9NZN4 543 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 EBF1Q9UH73 591 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 RCOR1Q9UKL0 485 aa12.36□□□□□ -0.43
USP3-214ENST00000559718 CNOT1A5YKK6 2376 aaKnown RBP12.36□□□□□ -0.43
USP3-214ENST00000559718 TNFRSF10BO14763 440 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 CCDC130P13994 396 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 HNRNPLP14866 589 aaKnown RBP eCLIP12.35□□□□□ -0.43
USP3-214ENST00000559718 PGFP49763 221 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 SLC5A3P53794 718 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 CLDN10P78369 228 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 ZNF667Q5HYK9 610 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 EMC10Q5UCC4 262 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 ANO7Q6IWH7 933 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 ACOT1Q86TX2 421 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 FUKQ8N0W3 1084 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 ZMIZ2Q8NF64 920 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 TSTD1Q8NFU3 115 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 WBP2Q969T9 261 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 ZFRQ96KR1 1074 aaKnown RBP12.35□□□□□ -0.43
USP3-214ENST00000559718 CCSER2Q9H7U1 834 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 ZDHHC4Q9NPG8 344 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.35□□□□□ -0.43
USP3-214ENST00000559718 EXOC1Q9NV70 894 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 GMIPQ9P107 970 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 HMGXB4Q9UGU5 601 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 PCDHGA5Q9Y5G8 931 aa12.35□□□□□ -0.43
USP3-214ENST00000559718 A0A1B0GVL5 298 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 SLC9A3R1O14745 358 aaPredicted RBP12.34□□□□□ -0.43
USP3-214ENST00000559718 TM4SF5O14894 197 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 FOXD2O60548 495 aaPredicted RBP12.34□□□□□ -0.43
USP3-214ENST00000559718 AP1G2O75843 785 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 BEST1O76090 585 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 RTN3O95197 1032 aaPredicted RBP12.34□□□□□ -0.43
USP3-214ENST00000559718 NR3C1P04150 777 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 BCKDHBP21953 392 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 GBP1P32455 592 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 LIMK1P53667 647 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 CREB5Q02930 508 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 LY6G5CQ5SRR4 150 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 C1orf220Q5T0J3 134 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 STPG1Q5TH74 334 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 ATL3Q6DD88 541 aa12.34□□□□□ -0.43
USP3-214ENST00000559718 IL31Q6EBC2 164 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms