RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 GPR17Q13304 367 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 LLGL1Q15334 1064 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 CDO1Q16878 200 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 CCDC14Q49A88 953 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 SLC8B1Q6J4K2 584 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 KIAA1841Q6NSI8 718 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 C17orf80Q9BSJ5 609 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 PCDHB5Q9Y5E4 795 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 ZNF638Q14966 1978 aaKnown RBP18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 LINC01553A4QN01 128 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 PDGFRAP16234 1089 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 GPD1P21695 349 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 IL1R2P27930 398 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 ATXN1P54253 815 aaKnown RBP18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 DAOAP59103 153 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 USP46P62068 366 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 ATP11AP98196 1134 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 TAP1Q03518 808 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 OTUD1Q5VV17 481 aaPredicted RBP18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 ANKS1BQ7Z6G8 1248 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 FAM149B1Q96BN6 582 aa18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 SEPT5Q99719 369 aaPredicted RBP18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 V9GYY5 206 aaPredicted RBP18.18■□□□□ 0.5
CHRNA3-206ENST00000559658 H7C4K7 107 aa18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 FYNP06241 537 aa18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 TCP1P17987 556 aaKnown RBP18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 MAN1A1P33908 653 aa18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 SSR1P43307 286 aaKnown RBP18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 DUSP4Q13115 394 aa18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 NAA30Q147X3 362 aaPredicted RBP18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 NFE2Q16621 373 aaPredicted RBP18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 KCTD19Q17RG1 926 aaPredicted RBP18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 CC2D1AQ6P1N0 951 aaPredicted RBP18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 NIPA2Q8N8Q9 360 aa18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 FNIP1Q8TF40 1166 aa18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 CALR3Q96L12 384 aaKnown RBP18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 RNPC3Q96LT9 517 aaKnown RBP18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 PEBP4Q96S96 227 aa18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 ALG13Q9NP73 1137 aaKnown RBP18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 PCDHB12Q9Y5F1 795 aa18.17■□□□□ 0.5
CHRNA3-206ENST00000559658 PRLRP16471 622 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 DNAJB1P25685 340 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 CTNNA2P26232 953 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 CTNNB1P35222 781 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 ZNF143P52747 638 aaPredicted RBP18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 SLC25A11Q02978 314 aaKnown RBP18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 MTMR3Q13615 1198 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 SMTNL2Q2TAL5 461 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 SYPL2Q5VXT5 272 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 ZDHHC17Q8IUH5 632 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 PHOSPHO2Q8TCD6 241 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 TSC1Q92574 1164 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 FUBP3Q96I24 572 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 ZBP1Q9H171 429 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 PCDHA3Q9Y5H8 950 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 BACE2Q9Y5Z0 518 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 CEP104O60308 925 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 SEC24AO95486 1093 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 ZBED1O96006 694 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 URODP06132 367 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 PYGMP11217 842 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 ATF6P18850 670 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 PPM1AP35813 382 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 MGAT5BQ3V5L5 792 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 CYP4V2Q6ZWL3 525 aaPredicted RBP18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 DEFB106AQ8N104 65 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 HERPUD2Q9BSE4 406 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 NAALADL1Q9UQQ1 740 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 TRANK1O15050 2925 aa18.16■□□□□ 0.5
CHRNA3-206ENST00000559658 CA3P07451 260 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 PBX2P40425 430 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 SLC1A1P43005 524 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 PIGHQ14442 188 aaPredicted RBP18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 WHAMMP3Q1A5X7 153 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 KCNT1Q5JUK3 1230 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 EDEM1Q92611 657 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 C11orf84Q9BUA3 381 aaPredicted RBP18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 UBXN6Q9BZV1 441 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 CNGB3Q9NQW8 809 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 AAASQ9NRG9 546 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 PCSK1NQ9UHG2 260 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 USP3Q9Y6I4 520 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 ATG2AQ2TAZ0 1938 aa18.15■□□□□ 0.5
CHRNA3-206ENST00000559658 MYO7AQ13402 2215 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 MIF4GDA9UHW6 222 aaKnown RBP18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 DPYSL4O14531 572 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 LILRB3O75022 631 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 HSF2BPO75031 334 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 DAB1O75553 588 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 SLU7O95391 586 aaKnown RBP18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 HAPLN1P10915 354 aaPredicted RBP18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 MIPP30301 263 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 CA8P35219 290 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 MAGEA11P43364 429 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 ADAM32Q8TC27 787 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 FAM172AQ8WUF8 416 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 TBCBQ99426 244 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms