RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 SDHBP21912 280 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 MCCD1P59942 119 aaPredicted RBP18.8■□□□□ 0.6
TPM1-218ENST00000559281 ZXDBP98169 803 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 DMWDQ09019 674 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 ZNF658Q5TYW1 1059 aaPredicted RBP18.8■□□□□ 0.6
TPM1-218ENST00000559281 CEP68Q76N32 757 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 ERMP1Q7Z2K6 904 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 FILIP1Q7Z7B0 1213 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 SMYD4Q8IYR2 804 aaPredicted RBP18.8■□□□□ 0.6
TPM1-218ENST00000559281 CAMKK1Q8N5S9 505 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 C12orf29Q8N999 325 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 SMARCE1Q969G3 411 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 CYFIP2Q96F07 1278 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 HNRNPABQ99729 332 aaKnown RBP18.8■□□□□ 0.6
TPM1-218ENST00000559281 NACA2Q9H009 215 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.8■□□□□ 0.6
TPM1-218ENST00000559281 FAM49BQ9NUQ9 324 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 CFAP97Q9P2B7 532 aa18.8■□□□□ 0.6
TPM1-218ENST00000559281 DMDP11532 3685 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 E2F8A0AVK6 867 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 FAM92AA1XBS5 289 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 RETP07949 1114 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 PRCPP42785 496 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 FKBP3Q00688 224 aaKnown RBP18.79■□□□□ 0.6
TPM1-218ENST00000559281 ORC1Q13415 861 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 COBLL1Q53SF7 1204 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 ACDQ96AP0 544 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 OTUB2Q96DC9 234 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 TIGD1Q96MW7 591 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 SMOQ99835 787 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 APOBEC3GQ9HC16 384 aaKnown RBP18.79■□□□□ 0.6
TPM1-218ENST00000559281 TLR8Q9NR97 1041 aaKnown RBP18.79■□□□□ 0.6
TPM1-218ENST00000559281 C2orf42Q9NWW7 574 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 HMGXB4Q9UGU5 601 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 SH3BP1Q9Y3L3 701 aa18.79■□□□□ 0.6
TPM1-218ENST00000559281 COCHO43405 550 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 ADH1CP00326 375 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 ZDHHC11BP0C7U3 371 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 CD58P19256 250 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 ADORA2BP29275 332 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 MXI1P50539 228 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 STIM1Q13586 685 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 PUM1Q14671 1186 aaKnown RBP eCLIP18.78■□□□□ 0.65e-9■□□□□ 8.1
TPM1-218ENST00000559281 DHCR24Q15392 516 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 LPAL2Q16609 132 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 PKN3Q6P5Z2 889 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 SYT13Q7L8C5 426 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 FBXL13Q8NEE6 735 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 ZMIZ2Q8NF64 920 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 ENGASEQ8NFI3 743 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 EEF2KMTQ96G04 330 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 FAM124BQ9H5Z6 455 aaPredicted RBP18.78■□□□□ 0.6
TPM1-218ENST00000559281 PNPLA8Q9NP80 782 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 RAB20Q9NX57 234 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 GMIPQ9P107 970 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 USP18Q9UMW8 372 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 PCDHA5Q9Y5H7 936 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 FANCMQ8IYD8 2048 aa18.78■□□□□ 0.6
TPM1-218ENST00000559281 ZNF292O60281 2723 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 PRR5-ARHGAP8B1AHC4 643 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 SLC16A3O15427 465 aaKnown RBP18.77■□□□□ 0.6
TPM1-218ENST00000559281 LRP3O75074 770 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 CILPO75339 1184 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 BEST1O76090 585 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 ARHGAP8P85298 464 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 LMNB2Q03252 620 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 NAIF1Q69YI7 327 aaPredicted RBP18.77■□□□□ 0.6
TPM1-218ENST00000559281 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.77■□□□□ 0.6
TPM1-218ENST00000559281 RPLP0P6Q8NHW5 317 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 SPATA20Q8TB22 786 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 RMDN1Q96DB5 314 aa18.77■□□□□ 0.6
TPM1-218ENST00000559281 SPTBN4Q9H254 2564 aa18.77■□□□□ 0.59
TPM1-218ENST00000559281 CYP17A1P05093 508 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 OPRD1P41143 372 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 EIF2DP41214 584 aaKnown RBP18.76■□□□□ 0.59
TPM1-218ENST00000559281 PPP1R2P41236 205 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 LRRC63Q05C16 580 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 GOLGA8FQ08AF8 430 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 GOLGA8DPQ0D2H9 430 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 PREPLQ4J6C6 727 aaPredicted RBP18.76■□□□□ 0.59
TPM1-218ENST00000559281 TCERG1LQ5VWI1 586 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 CLEC20AQ6ZU45 233 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 ELOA2Q8IYF1 753 aaPredicted RBP18.76■□□□□ 0.59
TPM1-218ENST00000559281 HEXIM2Q96MH2 286 aaKnown RBP18.76■□□□□ 0.59
TPM1-218ENST00000559281 TWNKQ96RR1 684 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 DUSP9Q99956 384 aaKnown RBP18.76■□□□□ 0.59
TPM1-218ENST00000559281 CCSER2Q9H7U1 834 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 SCML2Q9UQR0 700 aa18.76■□□□□ 0.59
TPM1-218ENST00000559281 DENND4CQ5VZ89 1909 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.75■□□□□ 0.59
TPM1-218ENST00000559281 PSMA7O14818 248 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 FOXD2O60548 495 aaPredicted RBP18.75■□□□□ 0.59
TPM1-218ENST00000559281 TLR5O60602 858 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 RPP40O75818 363 aaKnown RBP18.75■□□□□ 0.59
TPM1-218ENST00000559281 CCDC192P0DO97 292 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 ACO1P21399 889 aaKnown RBP18.75■□□□□ 0.59
TPM1-218ENST00000559281 ATP5C1P36542 298 aaKnown RBP18.75■□□□□ 0.59
TPM1-218ENST00000559281 GAD2Q05329 585 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 SRSF5Q13243 272 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms