RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 RIMKLBQ9ULI2 386 aa12.77□□□□□ -0.37
CASC4-208ENST00000559151 B9A039 149 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 SNX2O60749 519 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 VNN1O95497 513 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 CST5P28325 142 aaPredicted RBP12.76□□□□□ -0.37
CASC4-208ENST00000559151 RBL1P28749 1068 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 PRKAA2P54646 552 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 TAF12Q16514 161 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 RINT1Q6NUQ1 792 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 CLEC9AQ6UXN8 241 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 PALM2Q8IXS6 379 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 B3GALNT2Q8NCR0 500 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 LPIN2Q92539 896 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 SAYSD1Q9NPB0 183 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 DKK2Q9UBU2 259 aa12.76□□□□□ -0.37
CASC4-208ENST00000559151 RRN3P2A6NIE6 340 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 DHHO43323 396 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 SPDEFO95238 335 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 HTR7P34969 479 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 BMPR1AP36894 532 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 SCAPQ12770 1279 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 NFIXQ14938 502 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 BTBD16Q32M84 506 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
CASC4-208ENST00000559151 CLASRPQ8N2M8 674 aaKnown RBP12.75□□□□□ -0.37
CASC4-208ENST00000559151 C11orf44Q8N8P7 122 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 EXTL1Q92935 676 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 TBATAQ96M53 351 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 HAPLN3Q96S86 360 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 DDX23Q9BUQ8 820 aaKnown RBP12.75□□□□□ -0.37
CASC4-208ENST00000559151 INO80BQ9C086 356 aaPredicted RBP12.75□□□□□ -0.37
CASC4-208ENST00000559151 ZCWPW1Q9H0M4 648 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 USP22Q9UPT9 525 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 SLC27A6Q9Y2P4 619 aa12.75□□□□□ -0.37
CASC4-208ENST00000559151 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 ZAR1LA6NP61 321 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 K7ESM1 405 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 PLSCR1O15162 318 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 FAM155BO75949 473 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 EIF2B5Q13144 721 aaKnown RBP12.74□□□□□ -0.37
CASC4-208ENST00000559151 TP53BP2Q13625 1128 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 NRSN1Q8IZ57 195 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 SPPL3Q8TCT6 385 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 SSH3Q8TE77 659 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 C8orf49Q96NF6 230 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 GPR20Q99678 358 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 VN1R3Q9BXE9 311 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 PARPBPQ9NWS1 579 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 FEM1BQ9UK73 627 aa12.74□□□□□ -0.37
CASC4-208ENST00000559151 TAF5LO75529 589 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 ADD2P35612 726 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 MTHFSP49914 203 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 ATXN1P54253 815 aaKnown RBP12.73□□□□□ -0.37
CASC4-208ENST00000559151 PLP2Q04941 152 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
CASC4-208ENST00000559151 FBXO47Q5MNV8 452 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 ATPAF1Q5TC12 328 aaPredicted RBP12.73□□□□□ -0.37
CASC4-208ENST00000559151 C1orf210Q8IVY1 113 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 FSTL5Q8N475 847 aaPredicted RBP12.73□□□□□ -0.37
CASC4-208ENST00000559151 TTC9BQ8N6N2 239 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 SUN3Q8TAQ9 357 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 GLG1Q92896 1179 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 WDR24Q96S15 920 aa12.73□□□□□ -0.37
CASC4-208ENST00000559151 DRG1Q9Y295 367 aaKnown RBP12.73□□□□□ -0.37
CASC4-208ENST00000559151 LPXNO60711 386 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 SRGNP10124 158 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 CKMT1AP12532 417 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 LAG3P18627 525 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 TIRAPP58753 221 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 CUL4BQ13620 913 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 ADCK5Q3MIX3 580 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 USP39Q53GS9 565 aaKnown RBP12.72□□□□□ -0.37
CASC4-208ENST00000559151 RRAGAQ7L523 313 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 SLC25A43Q8WUT9 341 aaPredicted RBP12.72□□□□□ -0.37
CASC4-208ENST00000559151 FUBP1Q96AE4 644 aaKnown RBP12.72□□□□□ -0.37
CASC4-208ENST00000559151 MYEOVQ96EZ4 313 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 C20orf173Q96LM9 149 aa12.72□□□□□ -0.37
CASC4-208ENST00000559151 COL15A1P39059 1388 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 TMEM200CA6NKL6 621 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 RHOP08100 348 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 ANKRD45Q5TZF3 282 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 MAVSQ7Z434 540 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 GPR149Q86SP6 731 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 METTL25Q8N6Q8 603 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 MYCBPAPQ8TBZ2 947 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 RSC1A1Q92681 617 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 PTCD3Q96EY7 689 aaKnown RBP12.71□□□□□ -0.37
CASC4-208ENST00000559151 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
CASC4-208ENST00000559151 GLOD4Q9HC38 313 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 VPS45Q9NRW7 570 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 GJD2Q9UKL4 321 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 DAPP1Q9UN19 280 aa12.71□□□□□ -0.37
CASC4-208ENST00000559151 CBFA2T3O75081 653 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 JAKMIP3Q5VZ66 844 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 DTX2Q86UW9 622 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 C2CD5Q86YS7 1000 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 IL17REQ8NFR9 667 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
CASC4-208ENST00000559151 TRAPPC9Q96Q05 1148 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 PYM1Q9BRP8 204 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms