RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PNPLA8Q9NP80 782 aa11.49□□□□□ -0.57
TPM1-217ENST00000559108 TAS2R14Q9NYV8 317 aa11.49□□□□□ -0.57
TPM1-217ENST00000559108 AIPL1Q9NZN9 384 aa11.49□□□□□ -0.57
TPM1-217ENST00000559108 HESX1Q9UBX0 185 aa11.49□□□□□ -0.57
TPM1-217ENST00000559108 CHORDC1Q9UHD1 332 aaPredicted RBP11.49□□□□□ -0.57
TPM1-217ENST00000559108 MRPS23Q9Y3D9 190 aaKnown RBP11.49□□□□□ -0.57
TPM1-217ENST00000559108 DAAM1Q9Y4D1 1078 aa11.49□□□□□ -0.57
TPM1-217ENST00000559108 TICRRQ7Z2Z1 1910 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 A0A1W2PQH9 124 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 YJEFN3A6XGL0 299 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 E5RJQ4 531 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 E7ENQ6 273 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 PAPSS1O43252 624 aaPredicted RBP11.48□□□□□ -0.57
TPM1-217ENST00000559108 CBFA2T2O43439 604 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 MFAP3LO75121 409 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 CYP1A1P04798 512 aaPredicted RBP11.48□□□□□ -0.57
TPM1-217ENST00000559108 LAMP2P13473 410 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 LCP1P13796 627 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 YWHAQP27348 245 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 PRKCIP41743 596 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 PDE6CP51160 858 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 ADKP55263 362 aaKnown RBP11.48□□□□□ -0.57
TPM1-217ENST00000559108 PTP4A2Q12974 167 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 ARID5BQ14865 1188 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 TAF5Q15542 800 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 MEA1Q16626 185 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 FAM78AQ5JUQ0 283 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 SMYD5Q6GMV2 418 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 FGF14Q92915 247 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.57
TPM1-217ENST00000559108 FBXO32Q969P5 355 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 MRFAP1L1Q96HT8 127 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 CEP295NLQ96MC4 621 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 EDEM3Q9BZQ6 932 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 UBXN6Q9BZV1 441 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 RNF38Q9H0F5 515 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 LHX5Q9H2C1 402 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 ATXN3LQ9H3M9 355 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 HAUS4Q9H6D7 363 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 CCSER2Q9H7U1 834 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 ARHGAP20Q9P2F6 1191 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 NUDT5Q9UKK9 219 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 CDH7Q9ULB5 785 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 MYO6Q9UM54 1294 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 SCML2Q9UQR0 700 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 CCL26Q9Y258 94 aa11.48□□□□□ -0.57
TPM1-217ENST00000559108 DDX3XO00571 662 aaKnown RBP eCLIP11.47□□□□□ -0.57
TPM1-217ENST00000559108 MDM4O15151 490 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ADCY5O95622 1261 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 OLFM2O95897 454 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 TBX18O95935 607 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 OAS1P00973 400 aaKnown RBP11.47□□□□□ -0.57
TPM1-217ENST00000559108 FYNP06241 537 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ASGR2P07307 311 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 UNGP13051 313 aaPredicted RBP11.47□□□□□ -0.57
TPM1-217ENST00000559108 FERP16591 822 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 GBP2P32456 591 aaPredicted RBP11.47□□□□□ -0.57
TPM1-217ENST00000559108 KRT9P35527 623 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 VIPR2P41587 438 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 DAOAP59103 153 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ZBED6P86452 979 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 HTR4Q13639 388 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 STILQ15468 1287 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ASIC2Q16515 512 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 CYP4A22Q5TCH4 519 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 SFMBT2Q5VUG0 894 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 NAA35Q5VZE5 725 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 PM20D1Q6GTS8 502 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 TRNP1Q6NT89 227 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 PARM1Q6UWI2 310 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 CCDC186Q7Z3E2 898 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ADHFE1Q8IWW8 467 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 SCUBE3Q8IX30 993 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ELMOD1Q8N336 334 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 MAB21L3Q8N8X9 362 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 TC2NQ8N9U0 490 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 SLC30A5Q8TAD4 765 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ADAMTS19Q8TE59 1207 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 CPA5Q8WXQ8 436 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ZFRQ96KR1 1074 aaKnown RBP11.47□□□□□ -0.57
TPM1-217ENST00000559108 DNAJC7Q99615 494 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 AGPAT1Q99943 283 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ADAM33Q9BZ11 813 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 MIS12Q9H081 205 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 EPS15L1Q9UBC2 864 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 NENFQ9UMX5 172 aa11.47□□□□□ -0.57
TPM1-217ENST00000559108 ANHXE9PGG2 379 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 COCHO43405 550 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 MED7O43513 233 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 RTN3O95197 1032 aaPredicted RBP11.46□□□□□ -0.57
TPM1-217ENST00000559108 GJB6O95452 261 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 ZBED1O96006 694 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 HNRNPH3P31942 346 aaKnown RBP11.46□□□□□ -0.57
TPM1-217ENST00000559108 PITX1P78337 314 aaPredicted RBP11.46□□□□□ -0.57
TPM1-217ENST00000559108 CLEC16AQ2KHT3 1053 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 PUS10Q3MIT2 529 aaKnown RBP11.46□□□□□ -0.57
TPM1-217ENST00000559108 IER5LQ5T953 404 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 OTUD1Q5VV17 481 aaPredicted RBP11.46□□□□□ -0.57
TPM1-217ENST00000559108 SNX30Q5VWJ9 437 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms