RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 MGAT5BQ3V5L5 792 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ZACNQ401N2 412 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 COBLL1Q53SF7 1204 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 CYP4A22Q5TCH4 519 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ZNF658Q5TYW1 1059 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 GAREM2Q75VX8 874 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 MTSS1LQ765P7 747 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SV2AQ7L0J3 742 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ELOA2Q8IYF1 753 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 FAM186BQ8IYM0 893 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 LEMD2Q8NC56 503 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 STKLD1Q8NE28 680 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SMARCE1Q969G3 411 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SYAP1Q96A49 352 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 EEF2KMTQ96G04 330 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ZSWIM3Q96MP5 696 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 MMS19Q96T76 1030 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 KXD1Q9BQD3 176 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SYT15Q9BQS2 421 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 MRPL45Q9BRJ2 306 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 PI4K2AQ9BTU6 479 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 NUCKS1Q9H1E3 243 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SMYD3Q9H7B4 428 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 CRTAC1Q9NQ79 661 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 FRMD4BQ9Y2L6 1034 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 R3HCC1Q9Y3T6 440 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ASB3Q9Y575 518 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 PCDHB5Q9Y5E4 795 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 AK5Q9Y6K8 562 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 NCANO14594 1321 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 GREB1Q4ZG55 1949 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 COL4A2P08572 1712 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 VPS13AQ96RL7 3174 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 NUP210Q8TEM1 1887 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 WDR87Q6ZQQ6 2873 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SLC35F4A4IF30 521 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 KRBA1A5PL33 1030 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 KINO60870 393 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TACC1O75410 805 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SMC2O95347 1197 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 PDGFRBP09619 1106 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 BMP6P22004 513 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 CYP2F1P24903 491 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TARSP26639 723 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ATICP31939 592 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ANP32AP39687 249 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 VAMP7P51809 220 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 AP3M2P53677 418 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 PSMC1P62191 440 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TNNC1P63316 161 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 PPP3CAQ08209 521 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ADAM9Q13443 819 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TRPC3Q13507 836 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 NFE2Q16621 373 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ZNF699Q32M78 642 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 CFAP221Q4G0U5 840 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 FAM78AQ5JUQ0 283 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 STXBP5Q5T5C0 1151 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SDHAF4Q5VUM1 108 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 CWF19L1Q69YN2 538 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TANGO2Q6ICL3 276 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 FAM171BQ6P995 826 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SCARA5Q6ZMJ2 495 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 DNAJB7Q7Z6W7 309 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SUGP1Q8IWZ8 645 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ZC3H3Q8IXZ2 948 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ADSSL1Q8N142 457 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 MYLPFQ96A32 169 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 PLA2G2FQ9BZM2 168 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ABCB6Q9NP58 842 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SLC2A4RGQ9NR83 387 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 NXF1Q9UBU9 619 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 MAN1B1Q9UKM7 699 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 HCN2Q9UL51 889 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 CDH9Q9ULB4 789 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TRIM49BA6NDI0 452 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 IKBKBO14920 756 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 EFSO43281 561 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 ECI2O75521 394 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 ASS1P00966 412 aaKnown RBP6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 HLA-DRAP01903 254 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 FAM157BP0CG42 384 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 HMGA1P17096 107 aaKnown RBP6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 RPL13P26373 211 aaKnown RBP6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 GABRR2P28476 465 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 PSMC2P35998 433 aaKnown RBP6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 RAP1GAPP47736 663 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 CDH8P55286 799 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 GPC5P78333 572 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 CYP4F8P98187 520 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 UBAP2LQ14157 1087 aaKnown RBP6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 VEPH1Q14D04 833 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 DBN1Q16643 649 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 DDR2Q16832 855 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 ANKRD40Q6AI12 368 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 ISM2Q6H9L7 571 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 SPOPLQ6IQ16 392 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 INTS8Q75QN2 995 aaKnown RBP6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 TMEM150AQ86TG1 271 aa6.42□□□□□ -1.38
CTDSPL2-204ENST00000558966 ITIH5Q86UX2 942 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms