RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 MRPS5P82675 430 aaKnown RBP19■□□□□ 0.63
CLPX-203ENST00000558958 FAM102AQ5T9C2 384 aaPredicted RBP19■□□□□ 0.63
CLPX-203ENST00000558958 PM20D1Q6GTS8 502 aa19■□□□□ 0.63
CLPX-203ENST00000558958 SPATA31D4Q6ZUB0 917 aa19■□□□□ 0.63
CLPX-203ENST00000558958 ZNF564Q8TBZ8 553 aaPredicted RBP19■□□□□ 0.63
CLPX-203ENST00000558958 GPR152Q8TDT2 470 aa19■□□□□ 0.63
CLPX-203ENST00000558958 SELENOOQ9BVL4 669 aa19■□□□□ 0.63
CLPX-203ENST00000558958 ZNF576Q9H609 170 aa19■□□□□ 0.63
CLPX-203ENST00000558958 IL37Q9NZH6 218 aa19■□□□□ 0.63
CLPX-203ENST00000558958 YIPF1Q9Y548 306 aa19■□□□□ 0.63
CLPX-203ENST00000558958 MYO7AQ13402 2215 aa19■□□□□ 0.63
CLPX-203ENST00000558958 RFXAPO00287 272 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 MOCS3O95396 460 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 USP17L7P0C7H9 530 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 KRT3P12035 628 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 DAOAP59103 153 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 DENND5BQ6ZUT9 1274 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 SLC26A9Q7LBE3 791 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 KREMEN2Q8NCW0 462 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 STKLD1Q8NE28 680 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 FEZF2Q8TBJ5 459 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 NDRG1Q92597 394 aaKnown RBP18.99■□□□□ 0.63
CLPX-203ENST00000558958 KHSRPQ92945 711 aaKnown RBP eCLIP18.99■□□□□ 0.632e-8■■■□□ 17.2
CLPX-203ENST00000558958 CALR3Q96L12 384 aaKnown RBP18.99■□□□□ 0.63
CLPX-203ENST00000558958 IRX2Q9BZI1 471 aaPredicted RBP18.99■□□□□ 0.63
CLPX-203ENST00000558958 TMEM59LQ9UK28 342 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 INSL5Q9Y5Q6 135 aa18.99■□□□□ 0.63
CLPX-203ENST00000558958 TMEM191CA6NGB0 347 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 SART1O43290 800 aaKnown RBP18.98■□□□□ 0.63
CLPX-203ENST00000558958 RTN3O95197 1032 aaPredicted RBP18.98■□□□□ 0.63
CLPX-203ENST00000558958 ALDH1A3P47895 512 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 NAP1L1P55209 391 aaKnown RBP18.98■□□□□ 0.63
CLPX-203ENST00000558958 RPL7AP62424 266 aaKnown RBP18.98■□□□□ 0.63
CLPX-203ENST00000558958 TAF5Q15542 800 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 IFI16Q16666 785 aaKnown RBP18.98■□□□□ 0.63
CLPX-203ENST00000558958 PTPROQ16827 1216 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 DCUN1D2Q6PH85 259 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 BHLHA9Q7RTU4 235 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 ADGRD2Q7Z7M1 963 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 TPCN2Q8NHX9 752 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 GIPC2Q8TF65 315 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 IRGQQ8WZA9 623 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 MRPL38Q96DV4 380 aaKnown RBP18.98■□□□□ 0.63
CLPX-203ENST00000558958 MCEEQ96PE7 176 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 TRIM7Q9C029 511 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 FBXO44Q9H4M3 255 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 METTL5Q9NRN9 209 aaKnown RBP18.98■□□□□ 0.63
CLPX-203ENST00000558958 COMMD8Q9NX08 183 aa18.98■□□□□ 0.63
CLPX-203ENST00000558958 FAM92AA1XBS5 289 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 SLC38A8A6NNN8 435 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 RFC1P35251 1148 aaPredicted RBP18.97■□□□□ 0.63
CLPX-203ENST00000558958 USP46P62068 366 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 TWF1Q12792 350 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 EFHC1Q5JVL4 640 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 CCDC149Q6ZUS6 474 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 NYAP1Q6ZVC0 841 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 ARCQ7LC44 396 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 JOSD2Q8TAC2 188 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 SLC7A14Q8TBB6 771 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 SLC22A17Q8WUG5 538 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 ASNSD1Q9NWL6 643 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 ANAPC7Q9UJX3 599 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 SCML2Q9UQR0 700 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 CAPN6Q9Y6Q1 641 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 PLXNA3P51805 1871 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 TRIOBPQ9H2D6 2365 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 YJEFN3A6XGL0 299 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 E7ENQ6 273 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 PER2O15055 1255 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 KIF5CO60282 957 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 ZNF500O60304 480 aaPredicted RBP18.97■□□□□ 0.63
CLPX-203ENST00000558958 GRAP2O75791 330 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 GLI1P08151 1106 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 IFRD2Q12894 506 aaPredicted RBP18.97■□□□□ 0.63
CLPX-203ENST00000558958 PLD1Q13393 1074 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 MTMR3Q13615 1198 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 RTL10Q7L3V2 364 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 BTBD6Q96KE9 485 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 TTLL2Q9BWV7 592 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 PLEKHA4Q9H4M7 779 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 TLE6Q9H808 572 aa18.97■□□□□ 0.63
CLPX-203ENST00000558958 TMEM265A0A087WTH1 108 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 GRID2IPA4D2P6 1211 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 MYO1FO00160 1098 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 BUB1BO60566 1050 aaPredicted RBP18.96■□□□□ 0.63
CLPX-203ENST00000558958 HSF2BPO75031 334 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 C8AP07357 584 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 CSH1P0DML2 217 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 CSH2P0DML3 217 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 YWHAQP27348 245 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 COL4A4P53420 1690 aaPredicted RBP18.96■□□□□ 0.63
CLPX-203ENST00000558958 EPHB3P54753 998 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 RNASE9P60153 205 aaKnown RBP18.96■□□□□ 0.63
CLPX-203ENST00000558958 YWHAZP63104 245 aaKnown RBP18.96■□□□□ 0.63
CLPX-203ENST00000558958 HFE2Q6ZVN8 426 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 RBM23Q86U06 439 aaKnown RBP18.96■□□□□ 0.63
CLPX-203ENST00000558958 EMC1Q8N766 993 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 LRRC57Q8N9N7 239 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 FAM149B1Q96BN6 582 aa18.96■□□□□ 0.63
CLPX-203ENST00000558958 ATG2AQ2TAZ0 1938 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms