RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 TCF3P15923 654 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 DRD1P21728 446 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 PMS1P54277 932 aaKnown RBP12.62□□□□□ -0.39
HERC1-202ENST00000558324 INCA1Q0VD86 236 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 NR1H3Q13133 447 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 HECTD3Q5T447 861 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 ANKRD40Q6AI12 368 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 GPRIN1Q7Z2K8 1008 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 EZH1Q92800 747 aaPredicted RBP12.62□□□□□ -0.39
HERC1-202ENST00000558324 CYFIP2Q96F07 1278 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 GSDMAQ96QA5 445 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 NACA2Q9H009 215 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 CCSER2Q9H7U1 834 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 CYP3A43Q9HB55 503 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 HOOK1Q9UJC3 728 aaKnown RBP12.62□□□□□ -0.39
HERC1-202ENST00000558324 RAB23Q9ULC3 237 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 CILPO75339 1184 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 PAPSS2O95340 614 aaPredicted RBP12.61□□□□□ -0.39
HERC1-202ENST00000558324 CYP17A1P05093 508 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 IRF1P10914 325 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 GTF2H1P32780 548 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 PGFP49763 221 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 SEC13P55735 322 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 ENPEPQ07075 957 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 SIM2Q14190 667 aaPredicted RBP12.61□□□□□ -0.39
HERC1-202ENST00000558324 CBWD6Q4V339 395 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 CBWD3Q5JTY5 395 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 CBWD5Q5RIA9 395 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 CLEC20AQ6ZU45 233 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 LONP2Q86WA8 852 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 FBXL13Q8NEE6 735 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 RPLP0P6Q8NHW5 317 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 WHAMMQ8TF30 809 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 OVCA2Q8WZ82 227 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 SECISBP2LQ93073 1101 aaKnown RBP12.61□□□□□ -0.39
HERC1-202ENST00000558324 EXOC4Q96A65 974 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 ARID3AQ99856 593 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 RAB20Q9NX57 234 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 GMEB2Q9UKD1 530 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 MAN1B1Q9UKM7 699 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 SLC8A2Q9UPR5 921 aa12.61□□□□□ -0.39
HERC1-202ENST00000558324 SLC9A3R1O14745 358 aaPredicted RBP12.6□□□□□ -0.39
HERC1-202ENST00000558324 SLC16A3O15427 465 aaKnown RBP12.6□□□□□ -0.39
HERC1-202ENST00000558324 CYP26A1O43174 497 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 HRO43593 1189 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 STX10O60499 249 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 TLR5O60602 858 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 ATG13O75143 517 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 GADD45BO75293 160 aaPredicted RBP12.6□□□□□ -0.39
HERC1-202ENST00000558324 ACO1P21399 889 aaKnown RBP12.6□□□□□ -0.39
HERC1-202ENST00000558324 OPRD1P41143 372 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 ID4P47928 161 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 FKBP3Q00688 224 aaKnown RBP12.6□□□□□ -0.39
HERC1-202ENST00000558324 KLHL10Q6JEL2 608 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 CEP68Q76N32 757 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 DDX42Q86XP3 938 aaKnown RBP eCLIP12.6□□□□□ -0.39
HERC1-202ENST00000558324 SPATA20Q8TB22 786 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 TATDN2Q93075 761 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 ZFRQ96KR1 1074 aaKnown RBP12.6□□□□□ -0.39
HERC1-202ENST00000558324 HEXIM2Q96MH2 286 aaKnown RBP12.6□□□□□ -0.39
HERC1-202ENST00000558324 TIGD1Q96MW7 591 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 HHIPQ96QV1 700 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 HNRNPABQ99729 332 aaKnown RBP12.6□□□□□ -0.39
HERC1-202ENST00000558324 FBXO44Q9H4M3 255 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 IL37Q9NZH6 218 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 USP18Q9UMW8 372 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 SH3BP1Q9Y3L3 701 aa12.6□□□□□ -0.39
HERC1-202ENST00000558324 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 ANTXRLA6NF34 631 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 BIN1O00499 593 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 PSMA7O14818 248 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
HERC1-202ENST00000558324 TUBP50607 506 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 LRRC63Q05C16 580 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 KDSRQ06136 332 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 STIM1Q13586 685 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 DHCR24Q15392 516 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 GAB4Q2WGN9 574 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 FBXO43Q4G163 708 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 COBLL1Q53SF7 1204 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 PPP1R26Q5T8A7 1209 aaPredicted RBP12.59□□□□□ -0.39
HERC1-202ENST00000558324 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.59□□□□□ -0.39
HERC1-202ENST00000558324 WBP2Q969T9 261 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 RMDN1Q96DB5 314 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 DNAI2Q9GZS0 605 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 TLR8Q9NR97 1041 aaKnown RBP12.59□□□□□ -0.39
HERC1-202ENST00000558324 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 COMMD8Q9NX08 183 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
HERC1-202ENST00000558324 NUDT5Q9UKK9 219 aa12.59□□□□□ -0.39
HERC1-202ENST00000558324 FAM186AA6NE01 2351 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 E2F8A0AVK6 867 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 HHLA1C9JL84 531 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 MDM4O15151 490 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 TBX18O95935 607 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 ADH1CP00326 375 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 ADH5P11766 374 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 SLC6A11P48066 632 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms