RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GTF3C4Q9UKN8 822 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 ODF2LQ9ULJ1 636 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 R3HCC1Q9Y3T6 440 aaKnown RBP5.55□□□□□ -1.52
SPG11-208ENST00000558155 PTPRBP23467 1997 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 A0A087WV48 116 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 IGHV1OR15-9A0A0B4J2B8 117 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 A0A1B0GTW7 788 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 CAPN8A6NHC0 703 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 PP2D1A8MPX8 630 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 E9PAM4 449 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 CAPN9O14815 690 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 TRAK2O60296 914 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 JAK2O60674 1132 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 CBFA2T3O75081 653 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 GJB3O75712 270 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 FAM13AO94988 1023 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 IL18RAPO95256 599 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 ABL1P00519 1130 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 ZNF883P0CG24 379 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 ADH5P11766 374 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 GABRG2P18507 467 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 ACAT1P24752 427 aaKnown RBP5.54□□□□□ -1.52
SPG11-208ENST00000558155 ANXA13P27216 316 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 PCSK1P29120 753 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 NTSR1P30989 418 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 GRIK1P39086 918 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 PRPHP41219 470 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 SLC12A3P55017 1021 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 ANAPC15P60006 121 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 POSTNQ15063 836 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 MAPRE1Q15691 268 aaKnown RBP5.54□□□□□ -1.52
SPG11-208ENST00000558155 IL27RAQ6UWB1 636 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 VSTM1Q6UX27 236 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 DENND5BQ6ZUT9 1274 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 KCNK18Q7Z418 384 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 PACS2Q86VP3 889 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 SLC41A1Q8IVJ1 513 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 PDCL2Q8N4E4 241 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 ZNF513Q8N8E2 541 aaPredicted RBP5.54□□□□□ -1.52
SPG11-208ENST00000558155 STKLD1Q8NE28 680 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 ENGASEQ8NFI3 743 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 FBXO18Q8NFZ0 1043 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 RHBDD1Q8TEB9 315 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 OTUB2Q96DC9 234 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 HSPA12BQ96MM6 686 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 MMTAG2Q9BU76 263 aaKnown RBP5.54□□□□□ -1.52
SPG11-208ENST00000558155 RNF38Q9H0F5 515 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 PARVGQ9HBI0 331 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 CALCOCO1Q9P1Z2 691 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 DEC1Q9P2X7 70 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 AGO2Q9UKV8 859 aaKnown RBP5.54□□□□□ -1.52
SPG11-208ENST00000558155 PCOLCE2Q9UKZ9 415 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 CYP8B1Q9UNU6 501 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 AGAP1Q9UPQ3 857 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 STARD13Q9Y3M8 1113 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 PCDHB6Q9Y5E3 794 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 CPQQ9Y646 472 aa5.54□□□□□ -1.52
SPG11-208ENST00000558155 ANKRD11Q6UB99 2663 aaPredicted RBP5.54□□□□□ -1.52
SPG11-208ENST00000558155 PCDH15Q96QU1 1955 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 NPHP3-ACAD11A0A0J9YXS1 232 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 E2F8A0AVK6 867 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 ZNF840PA6NDX5 716 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 ANKRD63C9JTQ0 380 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 K7ENM7 598 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 TRIM66O15016 1216 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 ATXN7O15265 892 aaPredicted RBP5.53□□□□□ -1.52
SPG11-208ENST00000558155 CER1O95813 267 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 LDHAP00338 332 aaKnown RBP5.53□□□□□ -1.52
SPG11-208ENST00000558155 KRT18P05783 430 aaKnown RBP5.53□□□□□ -1.52
SPG11-208ENST00000558155 MBL2P11226 248 aaPredicted RBP5.53□□□□□ -1.52
SPG11-208ENST00000558155 HOXB2P14652 356 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 MAOBP27338 520 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 OXTRP30559 389 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 MATKP42679 507 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 WASP42768 502 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 ABCG1P45844 678 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 RBP5P82980 135 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 ZXDBP98169 803 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 TFAMQ00059 246 aaKnown RBP5.53□□□□□ -1.52
SPG11-208ENST00000558155 GTF2BQ00403 316 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 KDSRQ06136 332 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 IL17AQ16552 155 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 ARSHQ5FYA8 562 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 LY6G5CQ5SRR4 150 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 HYIQ5T013 277 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 C10orf76Q5T2E6 689 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 TDRD10Q5VZ19 366 aaKnown RBP5.53□□□□□ -1.52
SPG11-208ENST00000558155 FAM171BQ6P995 826 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 LRRC69Q6ZNQ3 347 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 DPH6Q7L8W6 267 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 C12orf40Q86WS4 652 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 SFTPA1Q8IWL2 248 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 CHPFQ8IZ52 775 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 CSGALNACT2Q8N6G5 542 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 TOP6BLQ8N6T0 577 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 LRRC52Q8N7C0 313 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 NAT16Q8N8M0 369 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 FAM184AQ8NB25 1140 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 IPO4Q8TEX9 1081 aaKnown RBP5.53□□□□□ -1.52
SPG11-208ENST00000558155 SCFD1Q8WVM8 642 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms