RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 FAM189BP81408 668 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 SLC7A5Q01650 507 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 PDCLQ13371 301 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 BRD3Q15059 726 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 CCDC142Q17RM4 750 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 GOLGA7BQ2TAP0 167 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 PLA2G4EQ3MJ16 856 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 ZNF468Q5VIY5 522 aaPredicted RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 KIAA0319Q5VV43 1072 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 WSCD1Q658N2 575 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 ARHGAP17Q68EM7 881 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 DNAJC24Q6P3W2 148 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 CD300LGQ6UXG3 332 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 LINC00114Q6XXX2 140 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 DPH6Q7L8W6 267 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 UNC93AQ86WB7 457 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 ECHDC2Q86YB7 292 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 FAM126BQ8IXS8 530 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 HACE1Q8IYU2 909 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 CRYBG2Q8N1P7 616 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 TOP6BLQ8N6T0 577 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 C3orf20Q8ND61 904 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 C3orf58Q8NDZ4 430 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 OR6B3Q8NGW1 331 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 JOSD2Q8TAC2 188 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 RNPC3Q96LT9 517 aaKnown RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 KRT12Q99456 494 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 HINFPQ9BQA5 517 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 PAAF1Q9BRP4 392 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 AP1M1Q9BXS5 423 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 MRPL47Q9HD33 250 aaKnown RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 DMGDHQ9UI17 866 aaKnown RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 KLF15Q9UIH9 416 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 TSPAN16Q9UKR8 245 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 KIAA1257Q9ULG3 409 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 CEP83Q9Y592 693 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 TCRBV7S2A1N4TA0A589 114 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 CCDC66A2RUB6 948 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 CASTOR2A6NHX0 329 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 SIGLEC16A6NMB1 481 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 A8MXQ7 604 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 C9IYK1 514 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 KBTBD13C9JR72 458 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 F8VP50 259 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 GOLGA8SH3BPF8 625 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 DNM1LO00429 736 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 KRIT1O00522 736 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 PODXLO00592 558 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 CYB561D2O14569 222 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 GABRDO14764 452 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 MSTNO14793 375 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 INPPL1O15357 1258 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 RAD51CO43502 376 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 NBNO60934 754 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 ATP2C2O75185 946 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 DKK1O94907 266 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 POMCP01189 267 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 FGGP02679 453 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 CCDC130P13994 396 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 IBSPP21815 317 aaPredicted RBP7.77□□□□□ -1.17
SPG11-204ENST00000557866 TKTP29401 623 aaKnown RBP7.77□□□□□ -1.17
SPG11-204ENST00000557866 SLC1A1P43005 524 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 AARSP49588 968 aaKnown RBP eCLIP7.77□□□□□ -1.17
SPG11-204ENST00000557866 RAB27AP51159 221 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 PSMC1P62191 440 aaKnown RBP7.77□□□□□ -1.17
SPG11-204ENST00000557866 ZNF268Q14587 947 aaPredicted RBP7.77□□□□□ -1.17
SPG11-204ENST00000557866 SIX1Q15475 284 aaPredicted RBP7.77□□□□□ -1.17
SPG11-204ENST00000557866 UPP1Q16831 310 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 KCTD19Q17RG1 926 aaPredicted RBP7.77□□□□□ -1.17
SPG11-204ENST00000557866 LONRF2Q1L5Z9 754 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 TCTN1Q2MV58 587 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 SV2CQ496J9 727 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 BEND6Q5SZJ8 279 aaPredicted RBP7.77□□□□□ -1.17
SPG11-204ENST00000557866 PMF1Q6P1K2 205 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 CC2D1AQ6P1N0 951 aaPredicted RBP7.77□□□□□ -1.17
SPG11-204ENST00000557866 WDR93Q6P2C0 686 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 ANKS1BQ7Z6G8 1248 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 KLHL7Q8IXQ5 586 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 ADGRF2Q8IZF7 708 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 ARFGAP1Q8N6T3 406 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 UBL4BQ8N7F7 174 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 TSEN2Q8NCE0 465 aaKnown RBP7.77□□□□□ -1.17
SPG11-204ENST00000557866 RNF169Q8NCN4 708 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 SLC35F5Q8WV83 523 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 UBE2Q2Q8WVN8 375 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 C18orf8Q96DM3 657 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 MCRS1Q96EZ8 462 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 SENP8Q96LD8 212 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 MCEEQ96PE7 176 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 DEFB118Q96PH6 123 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 HERPUD2Q9BSE4 406 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 RSAD1Q9HA92 442 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 RGS18Q9NS28 235 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 FAM49BQ9NUQ9 324 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 SLC38A7Q9NVC3 462 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 IP6K2Q9UHH9 426 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 OGDHLQ9ULD0 1010 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 HCN4Q9Y3Q4 1203 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 SCINQ9Y6U3 715 aa7.77□□□□□ -1.17
SPG11-204ENST00000557866 CCDC151A5D8V7 595 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms