RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 TCF3P15923 654 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 CASP4P49662 377 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 MXI1P50539 228 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 CCR3P51677 355 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 PNOCQ13519 176 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 ARID5BQ14865 1188 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 ZCWPW2Q504Y3 356 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 WDR44Q5JSH3 913 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 CPA6Q8N4T0 437 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 ENGASEQ8NFI3 743 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 ST13P5Q8NFI4 369 aaPredicted RBP12.12□□□□□ -0.47
LINC00648-204ENST00000557749 SPATA20Q8TB22 786 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 DHTKD1Q96HY7 919 aaPredicted RBP12.12□□□□□ -0.47
LINC00648-204ENST00000557749 MED10Q9BTT4 135 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 SLC46A2Q9BY10 475 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 GZF1Q9H116 711 aaPredicted RBP12.12□□□□□ -0.47
LINC00648-204ENST00000557749 METTL14Q9HCE5 456 aaKnown RBP12.12□□□□□ -0.47
LINC00648-204ENST00000557749 MAPK8IP1Q9UQF2 711 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 F5P12259 2224 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 F8VP50 259 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 SLC9A3R1O14745 358 aaPredicted RBP12.11□□□□□ -0.47
LINC00648-204ENST00000557749 ATP2C2O75185 946 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 PRAMEF12O95522 483 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 HLA-DRAP01903 254 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 TARSP26639 723 aaKnown RBP12.11□□□□□ -0.47
LINC00648-204ENST00000557749 TUBP50607 506 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 MCCD1P59942 119 aaPredicted RBP12.11□□□□□ -0.47
LINC00648-204ENST00000557749 YWHAEP62258 255 aaKnown RBP12.11□□□□□ -0.47
LINC00648-204ENST00000557749 CETN1Q12798 172 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 STXBP5Q5T5C0 1151 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 NUP93Q8N1F7 819 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 CRYBG2Q8N1P7 616 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 FBXL13Q8NEE6 735 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 ATP2A3Q93084 1043 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 CHAMP1Q96JM3 812 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 FAM84AQ96KN4 292 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 NT5C1AQ9BXI3 368 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 CHRDQ9H2X0 955 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 FBXO44Q9H4M3 255 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 SMYD3Q9H7B4 428 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 TRPC7Q9HCX4 862 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 PRM3Q9NNZ6 103 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 ARHGAP26Q9UNA1 814 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 PCDHGA2Q9Y5H1 932 aa12.11□□□□□ -0.47
LINC00648-204ENST00000557749 POM121CA8CG34 1229 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 ESPNB1AK53 854 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 ATG13O75143 517 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 VNN1O95497 513 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 NFATC1O95644 943 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 FGFR1OPO95684 399 aaKnown RBP12.1□□□□□ -0.47
LINC00648-204ENST00000557749 HDCP19113 662 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 YWHAQP27348 245 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
LINC00648-204ENST00000557749 PRCPP42785 496 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 GCLMP48507 274 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 IFNAR2P48551 515 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 GPR15P49685 360 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 SLC8A3P57103 927 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 DLG4P78352 724 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 INCA1Q0VD86 236 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 GRSF1Q12849 480 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00648-204ENST00000557749 MTF1Q14872 753 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 TXNDC8Q6A555 127 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 SCARA5Q6ZMJ2 495 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 TMEM150AQ86TG1 271 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 FAM35AQ86V20 835 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 TRIML1Q8N9V2 468 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 PLEKHO2Q8TD55 490 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 USP13Q92995 863 aaPredicted RBP12.1□□□□□ -0.47
LINC00648-204ENST00000557749 SECISBP2LQ93073 1101 aaKnown RBP12.1□□□□□ -0.47
LINC00648-204ENST00000557749 CEP63Q96MT8 703 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 PNPLA8Q9NP80 782 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 ARMCX3Q9UH62 379 aaPredicted RBP12.1□□□□□ -0.47
LINC00648-204ENST00000557749 NDRG2Q9UN36 371 aaKnown RBP12.1□□□□□ -0.47
LINC00648-204ENST00000557749 PCDHA5Q9Y5H7 936 aa12.1□□□□□ -0.47
LINC00648-204ENST00000557749 PTPRDP23468 1912 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 DENND4CQ5VZ89 1909 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 ZNF638Q14966 1978 aaKnown RBP12.09□□□□□ -0.47
LINC00648-204ENST00000557749 GNA14O95837 355 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 FAM200BP0CF97 657 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 CCNE1P24864 410 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 ASPAP45381 313 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 NDST1P52848 882 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 GOLGA8FQ08AF8 430 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 GOLGA8DPQ0D2H9 430 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 USP4Q13107 963 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 RUNX3Q13761 415 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 FBXO43Q4G163 708 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 PREPLQ4J6C6 727 aaPredicted RBP12.09□□□□□ -0.47
LINC00648-204ENST00000557749 SDHAF4Q5VUM1 108 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 TCERG1LQ5VWI1 586 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 VASH1Q7L8A9 365 aaPredicted RBP12.09□□□□□ -0.47
LINC00648-204ENST00000557749 TADA2BQ86TJ2 420 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 ADSSL1Q8N142 457 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 SPEM1Q8N4L4 309 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 OSCP1Q8WVF1 389 aa12.09□□□□□ -0.47
LINC00648-204ENST00000557749 FBXO32Q969P5 355 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms