RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 RPL34P49207 117 aaKnown RBP9.54□□□□□ -0.88
CHD8-214ENST00000557727 PGFP49763 221 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 CNGA2Q16280 664 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 MEA1Q16626 185 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 GOLGA7BQ2TAP0 167 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 FILIP1LQ4L180 1135 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 SGO2Q562F6 1265 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 FIGNQ5HY92 759 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 RAB41Q5JT25 222 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 BHLHA9Q7RTU4 235 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 GRASPQ7Z6J2 395 aaPredicted RBP9.54□□□□□ -0.88
CHD8-214ENST00000557727 NOP9Q86U38 636 aaKnown RBP9.54□□□□□ -0.88
CHD8-214ENST00000557727 ANKRD52Q8NB46 1076 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 ITFG1Q8TB96 612 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 SHKBP1Q8TBC3 707 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 EPS8L1Q8TE68 723 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 GIPC2Q8TF65 315 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 ATXN2LQ8WWM7 1075 aaKnown RBP9.54□□□□□ -0.88
CHD8-214ENST00000557727 ZNF606Q8WXB4 792 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 TCEAL4Q96EI5 215 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 TRMT2BQ96GJ1 504 aaKnown RBP9.54□□□□□ -0.88
CHD8-214ENST00000557727 CEP295NLQ96MC4 621 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 SYT11Q9BT88 431 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 DUSP16Q9BY84 665 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 DMAP1Q9NPF5 467 aaPredicted RBP9.54□□□□□ -0.88
CHD8-214ENST00000557727 NLRC4Q9NPP4 1024 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 CYTH4Q9UIA0 394 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 NOCTQ9UK39 431 aaKnown RBP9.54□□□□□ -0.88
CHD8-214ENST00000557727 TSPAN16Q9UKR8 245 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 ASB3Q9Y575 518 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 CLUHO75153 1309 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 ITIH6Q6UXX5 1313 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 TRIM66O15016 1216 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 MICAL2O94851 1124 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 LRG1P02750 347 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 F11P03951 625 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 GYPCP04921 128 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 FAM200BP0CF97 657 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 KRT5P13647 590 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 CHRNB2P17787 502 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 GNA15P30679 374 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 SSTR3P32745 418 aaPredicted RBP9.53□□□□□ -0.88
CHD8-214ENST00000557727 SOX5P35711 763 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 MTHFRP42898 656 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 GPD2P43304 727 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 ALDH1A3P47895 512 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 EPHB3P54753 998 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 MAP3K7CLP57077 242 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 RPL10AP62906 217 aaKnown RBP9.53□□□□□ -0.88
CHD8-214ENST00000557727 TPM4P67936 248 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 PDE4CQ08493 712 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 PLD1Q13393 1074 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 RAPGEF1Q13905 1077 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 LCE2CQ5TA81 110 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 DENND1BQ6P3S1 775 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 ELMSAN1Q6PJG2 1045 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 IRF2BP2Q7Z5L9 587 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 VSTM4Q8IW00 320 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 SCN4BQ8IWT1 228 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 WDTC1Q8N5D0 677 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 NEK11Q8NG66 645 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 SCAMP5Q8TAC9 235 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 SLC35F5Q8WV83 523 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 ASB2Q96Q27 587 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 MYADMQ96S97 322 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 CORO1BQ9BR76 489 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 PNPLA8Q9NP80 782 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 NCANO14594 1321 aa9.53□□□□□ -0.88
CHD8-214ENST00000557727 MYOFQ9NZM1 2061 aa9.52□□□□□ -0.88
CHD8-214ENST00000557727 COL4A3Q01955 1670 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 A0A1W2PQJ5 194 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 XPO1O14980 1071 aaKnown RBP9.52□□□□□ -0.89
CHD8-214ENST00000557727 XYLBO75191 536 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 ZDHHC11BP0C7U3 371 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 CD19P15391 556 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 CYP11B1P15538 503 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 GJA1P17302 382 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 CEBPBP17676 345 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 PTPN2P17706 415 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 CDH5P33151 784 aaPredicted RBP9.52□□□□□ -0.89
CHD8-214ENST00000557727 GRIK1P39086 918 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 PLA2G4AP47712 749 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 KIF11P52732 1056 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 SLC5A3P53794 718 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 BCAT1P54687 386 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 SH3BP2P78314 561 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 MRPS5P82675 430 aaKnown RBP9.52□□□□□ -0.89
CHD8-214ENST00000557727 ZP2Q05996 745 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.89
CHD8-214ENST00000557727 ARID5BQ14865 1188 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 PTPRNQ16849 979 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 PABPC1LQ4VXU2 614 aaKnown RBP9.52□□□□□ -0.89
CHD8-214ENST00000557727 ATAT1Q5SQI0 421 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 STXBP5Q5T5C0 1151 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 CES5AQ6NT32 575 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 PMF1Q6P1K2 205 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 DENND5BQ6ZUT9 1274 aa9.52□□□□□ -0.89
CHD8-214ENST00000557727 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHD8-214ENST00000557727 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms