RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CHORDC1Q9UHD1 332 aaPredicted RBP16.95■□□□□ 0.3
SCFD1-224ENST00000557713 CHD8Q9HCK8 2581 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 LAMA1P25391 3075 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 E2F8A0AVK6 867 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 LNP1A1A4G5 178 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 C4orf47A7E2U8 309 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 SGK1O00141 431 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 COCHO43405 550 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 KIR2DL1P43626 348 aaPredicted RBP16.94■□□□□ 0.3
SCFD1-224ENST00000557713 CASP4P49662 377 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 CLDN10P78369 228 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 IFRD2Q12894 506 aaPredicted RBP16.94■□□□□ 0.3
SCFD1-224ENST00000557713 KNOP1Q1ED39 458 aaKnown RBP16.94■□□□□ 0.3
SCFD1-224ENST00000557713 HSF5Q4G112 596 aaPredicted RBP16.94■□□□□ 0.3
SCFD1-224ENST00000557713 EMC10Q5UCC4 262 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 PHTF2Q8N3S3 785 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 TXNDC5Q8NBS9 432 aaKnown RBP16.94■□□□□ 0.3
SCFD1-224ENST00000557713 SCAMP5Q8TAC9 235 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 SMYD3Q9H7B4 428 aa16.94■□□□□ 0.3
SCFD1-224ENST00000557713 ZFHX4Q86UP3 3567 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 EXOC3O60645 756 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 PHACTR2O75167 634 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 KLF8O95600 359 aaPredicted RBP16.93■□□□□ 0.3
SCFD1-224ENST00000557713 ADH1CP00326 375 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 C4BPAP04003 597 aaKnown RBP16.93■□□□□ 0.3
SCFD1-224ENST00000557713 APODP05090 189 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 ZDHHC11BP0C7U3 371 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 ADH5P11766 374 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 TIE1P35590 1138 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 P2RY2P41231 377 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 GRIA2P42262 883 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 TNFRSF4P43489 277 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 CUL4BQ13620 913 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 LY6G5CQ5SRR4 150 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 HECTD3Q5T447 861 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 PARD3BQ8TEW8 1205 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 FBXO32Q969P5 355 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 OTUB2Q96DC9 234 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 DUSP9Q99956 384 aaKnown RBP16.93■□□□□ 0.3
SCFD1-224ENST00000557713 ARHGEF4Q9NR80 690 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 COMMD8Q9NX08 183 aa16.93■□□□□ 0.3
SCFD1-224ENST00000557713 FAM92AA1XBS5 289 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 LRRIQ3A6PVS8 624 aaPredicted RBP16.92■□□□□ 0.3
SCFD1-224ENST00000557713 PATE3B3GLJ2 98 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 CDX4O14627 284 aaPredicted RBP16.92■□□□□ 0.3
SCFD1-224ENST00000557713 KHNYNO15037 678 aaKnown RBP16.92■□□□□ 0.3
SCFD1-224ENST00000557713 ADAM23O75077 832 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 ALDH1A2O94788 518 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 VNN1O95497 513 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 AFMP43652 599 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 AP3M2P53677 418 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 GAD2Q05329 585 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 EOGTQ5NDL2 527 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 PSAPL1Q6NUJ1 521 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 FAM35AQ86V20 835 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 TTC30AQ86WT1 665 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 TMEM174Q8WUU8 243 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 ELMO3Q96BJ8 720 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 SDCBP2Q9H190 292 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 CCSER2Q9H7U1 834 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 DMAC2Q9NW81 257 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 PCDHA7Q9UN72 937 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 ATP8B3O60423 1300 aa16.92■□□□□ 0.3
SCFD1-224ENST00000557713 MAP1BP46821 2468 aaKnown RBP16.91■□□□□ 0.3
SCFD1-224ENST00000557713 CNOT1A5YKK6 2376 aaKnown RBP16.91■□□□□ 0.3
SCFD1-224ENST00000557713 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.91■□□□□ 0.3
SCFD1-224ENST00000557713 GIPC1O14908 333 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 DHPSP49366 369 aaPredicted RBP16.91■□□□□ 0.3
SCFD1-224ENST00000557713 TUBP50607 506 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 SLC5A3P53794 718 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 IRX4P78413 519 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 KDSRQ06136 332 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 BIRC3Q13489 604 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 NCOA4Q13772 614 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 ZNF699Q32M78 642 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 ZNF667Q5HYK9 610 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 DAB2IPQ5VWQ8 1189 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 RESP18Q5W5W9 173 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 CYP2U1Q7Z449 544 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 ETFBKMTQ8IXQ9 262 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 FUKQ8N0W3 1084 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 FRMD1Q8N878 549 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 ZMIZ2Q8NF64 920 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 GOLGA5Q8TBA6 731 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 RLN3Q8WXF3 142 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 WBP2Q969T9 261 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 TNIP3Q96KP6 325 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 MED10Q9BTT4 135 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 POLMQ9NP87 494 aaPredicted RBP16.91■□□□□ 0.3
SCFD1-224ENST00000557713 DMAP1Q9NPF5 467 aaPredicted RBP16.91■□□□□ 0.3
SCFD1-224ENST00000557713 ZDHHC4Q9NPG8 344 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 TMEM9BQ9NQ34 198 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 FAM13BQ9NYF5 915 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 MBD1Q9UIS9 605 aaPredicted RBP16.91■□□□□ 0.3
SCFD1-224ENST00000557713 ABCA7Q8IZY2 2146 aa16.91■□□□□ 0.3
SCFD1-224ENST00000557713 HOXC11O43248 304 aaPredicted RBP16.9■□□□□ 0.3
SCFD1-224ENST00000557713 KLRC4O43908 158 aa16.9■□□□□ 0.3
SCFD1-224ENST00000557713 PGFP49763 221 aa16.9■□□□□ 0.3
SCFD1-224ENST00000557713 NOVA1P51513 510 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms