RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CDH5P33151 784 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-234ENST00000557703 APBA1Q02410 837 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 MTMR3Q13615 1198 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 TEAD2Q15562 447 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 GPR158Q5T848 1215 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 SDHAF4Q5VUM1 108 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 TRIM72Q6ZMU5 477 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 BEND5Q7L4P6 421 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 TMEM110Q86TL2 294 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 DDX42Q86XP3 938 aaKnown RBP eCLIP14.42□□□□□ -0.1
SHMT2-234ENST00000557703 MSANTD4Q8NCY6 345 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 KCNK12Q9HB15 430 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 AIPL1Q9NZN9 384 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 IFNKQ9P0W0 207 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 CDH22Q9UJ99 828 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 SORCS3Q9UPU3 1222 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 BZW2Q9Y6E2 419 aaKnown RBP14.42□□□□□ -0.1
SHMT2-234ENST00000557703 DENND4CQ5VZ89 1909 aa14.42□□□□□ -0.1
SHMT2-234ENST00000557703 TRAV19A0A0A6YYK7 116 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 DPYSL4O14531 572 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 ZBED1O96006 694 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 RALAP11233 206 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 USP46P62068 366 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 TDGQ13569 410 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 HTR4Q13639 388 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 HECTD3Q5T447 861 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 SLC47A2Q86VL8 602 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 RNF135Q8IUD6 432 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 ZDHHC17Q8IUH5 632 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 ARID3BQ8IVW6 561 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-234ENST00000557703 SIX6OS1Q8N1H7 587 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 CELF5Q8N6W0 485 aaKnown RBP14.41□□□□□ -0.1
SHMT2-234ENST00000557703 TMEM35BQ8NCS4 154 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 SCAMP5Q8TAC9 235 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 ZSCAN18Q8TBC5 510 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-234ENST00000557703 EPS8L1Q8TE68 723 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 MCRS1Q96EZ8 462 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 ZSWIM1Q9BR11 485 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 SLC4A5Q9BY07 1137 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 SLC46A2Q9BY10 475 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 NLRC4Q9NPP4 1024 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 TRPV5Q9NQA5 729 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 TDP1Q9NUW8 608 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 LIMD1Q9UGP4 676 aa14.41□□□□□ -0.1
SHMT2-234ENST00000557703 OLFM2O95897 454 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 OAS1P00973 400 aaKnown RBP14.4□□□□□ -0.1
SHMT2-234ENST00000557703 GLI1P08151 1106 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 TPM1P09493 284 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 HDCP19113 662 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 KLK7P49862 253 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 TKTL1P51854 596 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 SLC7A9P82251 487 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 PLCB2Q00722 1185 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 PFKPQ01813 784 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 CDR2Q01850 454 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 FAM78AQ5JUQ0 283 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 SPECC1LQ69YQ0 1117 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 PMF1Q6P1K2 205 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 MFSD6LQ8IWD5 586 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 RNF214Q8ND24 703 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 UBA3Q8TBC4 463 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 GOLGA1Q92805 767 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 SECISBP2LQ93073 1101 aaKnown RBP14.4□□□□□ -0.1
SHMT2-234ENST00000557703 TTYH3Q9C0H2 523 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 PDCL3Q9H2J4 239 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 OLA1Q9NTK5 396 aaKnown RBP14.4□□□□□ -0.1
SHMT2-234ENST00000557703 THG1LQ9NWX6 298 aaKnown RBP14.4□□□□□ -0.1
SHMT2-234ENST00000557703 CAPN11Q9UMQ6 739 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 ARHGAP26Q9UNA1 814 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 LUC7L2Q9Y383 392 aaKnown RBP14.4□□□□□ -0.1
SHMT2-234ENST00000557703 PATJQ8NI35 1801 aa14.4□□□□□ -0.1
SHMT2-234ENST00000557703 EPHB6O15197 1021 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 TADA3O75528 432 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 PSMC3P17980 439 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 ATP5C1P36542 298 aaKnown RBP14.39□□□□□ -0.11
SHMT2-234ENST00000557703 SCNN1AP37088 669 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 MLLT6P55198 1093 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-234ENST00000557703 ZBED6P86452 979 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 GOLGA8FQ08AF8 430 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 GOLGA8DPQ0D2H9 430 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 PTPN21Q16825 1174 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 TXNDC8Q6A555 127 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 C1orf228Q6PIY5 440 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 DRC7Q8IY82 874 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 SLC44A3Q8N4M1 653 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 MAB21L3Q8N8X9 362 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 C1orf131Q8NDD1 294 aaKnown RBP14.39□□□□□ -0.11
SHMT2-234ENST00000557703 FEZF2Q8TBJ5 459 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 ING5Q8WYH8 240 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 DDX1Q92499 740 aaKnown RBP14.39□□□□□ -0.11
SHMT2-234ENST00000557703 BAP1Q92560 729 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 XPO4Q9C0E2 1151 aaKnown RBP14.39□□□□□ -0.11
SHMT2-234ENST00000557703 ABCC13Q9NSE7 274 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 ASNSD1Q9NWL6 643 aa14.39□□□□□ -0.11
SHMT2-234ENST00000557703 CHORDC1Q9UHD1 332 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-234ENST00000557703 AJAP1Q9UKB5 411 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-234ENST00000557703 GFPT2O94808 682 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 PRKCIP41743 596 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 CDR1P51861 262 aa14.38□□□□□ -0.11
SHMT2-234ENST00000557703 KPNA1P52294 538 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms