RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 GRK7Q8WTQ7 553 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 CLEC4CQ8WTT0 213 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 FAM172AQ8WUF8 416 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 TEKT4Q8WW24 435 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 CASKIN2Q8WXE0 1202 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 RAPGEF5Q92565 580 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 SLCO2A1Q92959 643 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 CFAP57Q96MR6 1250 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 HEMGNQ9BXL5 484 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 PNPLA8Q9NP80 782 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 NGRNQ9NPE2 291 aaKnown RBP13.07□□□□□ -0.32
SHMT2-233ENST00000557529 DMAP1Q9NPF5 467 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-233ENST00000557529 FAM114A2Q9NRY5 505 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 KLHL11Q9NVR0 708 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 PCSK1NQ9UHG2 260 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 FAN1Q9Y2M0 1017 aa13.07□□□□□ -0.32
SHMT2-233ENST00000557529 SF3B1O75533 1304 aaKnown RBP eCLIP13.06□□□□□ -0.32
SHMT2-233ENST00000557529 F8W810 466 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 ECEL1O95672 775 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 KDELR1P24390 212 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 GBP1P32455 592 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 PTGIRP43119 386 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 SLC11A1P49279 550 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 GATMP50440 423 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 LBX1P52954 281 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 ATP11AP98196 1134 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 NNTQ13423 1086 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 PDK2Q15119 407 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 NFE2Q16621 373 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-233ENST00000557529 TAZQ16635 292 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 C15orf59Q2T9L4 293 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-233ENST00000557529 RAB41Q5JT25 222 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 SYDE1Q6ZW31 735 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-233ENST00000557529 STRADAQ7RTN6 431 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 NECAB2Q7Z6G3 386 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 SPATA2LQ8IUW3 424 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-233ENST00000557529 MAP7D3Q8IWC1 876 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 SCML4Q8N228 414 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 ZMIZ2Q8NF64 920 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 IFT81Q8WYA0 676 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 SEC14L1Q92503 715 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 CENPIQ92674 756 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-233ENST00000557529 FAM149B1Q96BN6 582 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 PAWRQ96IZ0 340 aaKnown RBP13.06□□□□□ -0.32
SHMT2-233ENST00000557529 ERP44Q9BS26 406 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 HERPUD2Q9BSE4 406 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 C11orf84Q9BUA3 381 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-233ENST00000557529 TMEM106CQ9BVX2 250 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 OXCT2Q9BYC2 517 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-233ENST00000557529 STAP1Q9ULZ2 295 aa13.06□□□□□ -0.32
SHMT2-233ENST00000557529 TTC3P53804 2025 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 ABHD14A-ACY1A0A1B0GW23 586 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 OR6C75A6NL08 312 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 C3orf70A6NLC5 250 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-233ENST00000557529 HHLA1C9JL84 531 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 EFCAB14O75071 495 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 GAS8O95995 478 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 BDNFP23560 247 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 NOS2P35228 1153 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
SHMT2-233ENST00000557529 DRG2P55039 364 aaKnown RBP13.05□□□□□ -0.32
SHMT2-233ENST00000557529 DAOAP59103 153 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 LMNB2Q03252 620 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 LLGL1Q15334 1064 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 CDO1Q16878 200 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 LRRC26Q2I0M4 334 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 SMTNL2Q2TAL5 461 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 SLC25A52Q3SY17 297 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 SH3PXD2AQ5TCZ1 1133 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 ZNF280DQ6N043 979 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 TTC27Q6P3X3 843 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 LRRTM3Q86VH5 581 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 VSIG1Q86XK7 387 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 TTC13Q8NBP0 860 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 ATL2Q8NHH9 583 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 C1orf54Q8WWF1 131 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 IRGQQ8WZA9 623 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 HSPH1Q92598 858 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 CAVIN3Q969G5 261 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 SLC2A13Q96QE2 648 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 KCNK16Q96T55 309 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 HINFPQ9BQA5 517 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 TRIM62Q9BVG3 475 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 FUT8Q9BYC5 575 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 FRMD8P1Q9BZ68 369 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-233ENST00000557529 ULBP1Q9BZM6 244 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 ZCWPW1Q9H0M4 648 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 PLEKHA4Q9H4M7 779 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 POPDC2Q9HBU9 364 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 TMLHEQ9NVH6 421 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 RRN3Q9NYV6 651 aa13.05□□□□□ -0.32
SHMT2-233ENST00000557529 ESYT3A0FGR9 886 aa13.04□□□□□ -0.32
SHMT2-233ENST00000557529 ZSCAN5CA6NGD5 496 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-233ENST00000557529 H7C4K7 107 aa13.04□□□□□ -0.32
SHMT2-233ENST00000557529 KIAA0355O15063 1070 aa13.04□□□□□ -0.32
SHMT2-233ENST00000557529 MDM4O15151 490 aa13.04□□□□□ -0.32
SHMT2-233ENST00000557529 ENDOD1O94919 500 aa13.04□□□□□ -0.32
SHMT2-233ENST00000557529 ZBED1O96006 694 aa13.04□□□□□ -0.32
SHMT2-233ENST00000557529 TIMP1P01033 207 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms