RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SMTNP53814 917 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 EHHADHQ08426 723 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 ZNF268Q14587 947 aaPredicted RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 MTF1Q14872 753 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 PDGFRLQ15198 375 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 ZNF77Q15935 545 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 IL17AQ16552 155 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 USP39Q53GS9 565 aaKnown RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 SDHAF4Q5VUM1 108 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 C9orf57Q5W0N0 161 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 KRT79Q5XKE5 535 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 WSCD1Q658N2 575 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 ANO7Q6IWH7 933 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 PRICKLE2Q7Z3G6 844 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 MON1AQ86VX9 555 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 CPA6Q8N4T0 437 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 TTC16Q8NEE8 873 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 MDGA1Q8NFP4 955 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 OSCP1Q8WVF1 389 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 CD101Q93033 1021 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 ATP2A3Q93084 1043 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 C8orf76Q96K31 380 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 DMRTB1Q96MA1 342 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 SLC22A12Q96S37 553 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 TIPINQ9BVW5 301 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 RAB34Q9BZG1 259 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 RPF1Q9H9Y2 349 aaKnown RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 TMLHEQ9NVH6 421 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 GEMIN8Q9NWZ8 242 aaKnown RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 DUS2Q9NX74 493 aaKnown RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 KLK13Q9UKR3 277 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 DSEQ9UL01 958 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 MAGED2Q9UNF1 606 aaPredicted RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 NEUROG3Q9Y4Z2 214 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 PCDHB11Q9Y5F2 797 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 WNT6Q9Y6F9 365 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 ASCC3Q8N3C0 2202 aaKnown RBP6.3□□□□□ -1.4
VPS33B-207ENST00000557470 NUP205Q92621 2012 aa6.3□□□□□ -1.4
VPS33B-207ENST00000557470 KIAA1549LQ6ZVL6 1849 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 A0A0B4J269 797 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 NPHP3-ACAD11A0A0J9YXS1 232 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 SPAARA0A1B0GVQ0 90 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 CDC14CA4D256 554 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 FAM181BA6NEQ2 426 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 MEN1O00255 615 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 CYB561D2O14569 222 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 OGTO15294 1046 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 ANK1P16157 1881 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 PAX3P23760 479 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 DHPSP49366 369 aaPredicted RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 LIG4P49917 911 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 TOB1P50616 345 aaPredicted RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 RNF144AP50876 292 aaPredicted RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 SLC12A3P55017 1021 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 NCKAP1LP55160 1127 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 TBX4P57082 545 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 FAM160A1Q05DH4 1040 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 SMARCB1Q12824 385 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 USP4Q13107 963 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 BIRC2Q13490 618 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 TMEM132DQ14C87 1099 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 ZRSR1Q15695 479 aaKnown RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 KYAT1Q16773 422 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 ZNF394Q53GI3 561 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 C2orf27AQ580R0 203 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 TRIM61Q5EBN2 209 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 SLC39A4Q6P5W5 647 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 CAPN12Q6ZSI9 719 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 ARMCX6Q7L4S7 300 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 LYSMD3Q7Z3D4 306 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 C11orf74Q86VG3 221 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 RASSF3Q86WH2 238 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 METTL23Q86XA0 190 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 CD302Q8IX05 232 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 EFCAB13Q8IY85 973 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 CCDC33Q8N5R6 958 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 FBXO18Q8NFZ0 1043 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 SPPL2BQ8TCT7 592 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 USP33Q8TEY7 942 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 C2orf15Q8WU43 125 aaKnown RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 RLN3Q8WXF3 142 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 PIGKQ92643 395 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 MRPS31Q92665 395 aaKnown RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 EXOC4Q96A65 974 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 CNOT6LQ96LI5 555 aaKnown RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 TSPAN18Q96SJ8 248 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 CYP2S1Q96SQ9 504 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 PLIN2Q99541 437 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 PYM1Q9BRP8 204 aaKnown RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 PI4K2AQ9BTU6 479 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 MSTO1Q9BUK6 570 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 TRPC7Q9HCX4 862 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 EVLQ9UI08 416 aaPredicted RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 CPSF3Q9UKF6 684 aaKnown RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 NOL7Q9UMY1 257 aaKnown RBP6.29□□□□□ -1.4
VPS33B-207ENST00000557470 MSRB2Q9Y3D2 182 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 PCDHB6Q9Y5E3 794 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 MYO16Q9Y6X6 1858 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 DENND4CQ5VZ89 1909 aa6.29□□□□□ -1.4
VPS33B-207ENST00000557470 FLNBO75369 2602 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms