RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 SNX9Q9Y5X1 595 aa13.41□□□□□ -0.26
PSEN1-221ENST00000557293 TBC1D3BA6NDS4 549 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 TULP3O75386 442 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 NDUFV2P19404 249 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 MAOBP27338 520 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 PCSK1P29120 753 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 CACNA2D1P54289 1103 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 PSMC1P62191 440 aaKnown RBP13.4□□□□□ -0.26
PSEN1-221ENST00000557293 BNC1Q01954 994 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 CAMK2BQ13554 666 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 DBX2Q6ZNG2 339 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 BRSK2Q8IWQ3 736 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 ADGRF2Q8IZF7 708 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 ZNF513Q8N8E2 541 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-221ENST00000557293 BAHD1Q8TBE0 780 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-221ENST00000557293 MYLPFQ96A32 169 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 CDK5RAP3Q96JB5 506 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 SYT15Q9BQS2 421 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 PCOLCE2Q9UKZ9 415 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 CYP8B1Q9UNU6 501 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 STARD13Q9Y3M8 1113 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 PCDHB9Q9Y5E1 797 aa13.4□□□□□ -0.26
PSEN1-221ENST00000557293 SMG1Q96Q15 3661 aaKnown RBP13.4□□□□□ -0.27
PSEN1-221ENST00000557293 ASH1LQ9NR48 2969 aaKnown RBP13.39□□□□□ -0.27
PSEN1-221ENST00000557293 E2F8A0AVK6 867 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 ADH1CP00326 375 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 PRB1P04280 392 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 NTSR1P30989 418 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 GRIK1P39086 918 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 PPP3CCP48454 512 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
PSEN1-221ENST00000557293 HMGN5P82970 282 aaKnown RBP13.39□□□□□ -0.27
PSEN1-221ENST00000557293 GAD2Q05329 585 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 TAF10Q12962 218 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 POSTNQ15063 836 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 PLEKHG6Q3KR16 790 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 EGFLAMQ63HQ2 1017 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 C4orf50Q6ZRC1 276 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 TMEM25Q86YD3 366 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 POMGNT1Q8WZA1 660 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 C8orf48Q96LL4 319 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 FAM213AQ9BRX8 229 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 SLC6A17Q9H1V8 727 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 ZHX3Q9H4I2 956 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 IL21RQ9HBE5 538 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 TBC1D14Q9P2M4 693 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 CDH9Q9ULB4 789 aa13.39□□□□□ -0.27
PSEN1-221ENST00000557293 APOBEC2Q9Y235 224 aaKnown RBP13.39□□□□□ -0.27
PSEN1-221ENST00000557293 BPTFQ12830 3046 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 A0A087WV48 116 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 TRABD2BA6NFA1 517 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 CYSRT1A8MQ03 144 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-221ENST00000557293 F8VP50 259 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 HOXC11O43248 304 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-221ENST00000557293 SLC26A4O43511 780 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 ZNF217O75362 1048 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 C1QL1O75973 258 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 PDGFRBP09619 1106 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 ATXN1LP0C7T5 689 aaKnown RBP13.38□□□□□ -0.27
PSEN1-221ENST00000557293 HOXB2P14652 356 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 RBP5P82980 135 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 GRIN1Q05586 938 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 CYP4F3Q08477 520 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 GRIK2Q13002 908 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 C10orf76Q5T2E6 689 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 ARL6IP4Q66PJ3 421 aaKnown RBP13.38□□□□□ -0.27
PSEN1-221ENST00000557293 TERB1Q8NA31 727 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 IPO4Q8TEX9 1081 aaKnown RBP13.38□□□□□ -0.27
PSEN1-221ENST00000557293 CACTINQ8WUQ7 758 aaKnown RBP13.38□□□□□ -0.27
PSEN1-221ENST00000557293 DNASE2BQ8WZ79 361 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 RAD54LQ92698 747 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 ERLEC1Q96DZ1 483 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 SAAL1Q96ER3 474 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 PCED1BQ96HM7 432 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 FAM124BQ9H5Z6 455 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-221ENST00000557293 PDE11AQ9HCR9 933 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 DEC1Q9P2X7 70 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 ITGA11Q9UKX5 1188 aa13.38□□□□□ -0.27
PSEN1-221ENST00000557293 GOLGA8IPA6NC78 632 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 GOLGA8JA6NMD2 632 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 PRRT4C9JH25 899 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 COCHO43405 550 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 GREM1O60565 184 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 MBL2P11226 248 aaPredicted RBP13.37□□□□□ -0.27
PSEN1-221ENST00000557293 ABCD1P33897 745 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 RILPL1Q5EBL4 403 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 SFR1Q86XK3 245 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 BBS7Q8IWZ6 715 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 SCUBE3Q8IX30 993 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 RGL4Q8IZJ4 473 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 FAM184AQ8NB25 1140 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 OR5B17Q8NGF7 314 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 MYCBPAPQ8TBZ2 947 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 OTUB2Q96DC9 234 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 MRGPRX1Q96LB2 322 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 GABRG3Q99928 467 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 DUSP9Q99956 384 aaKnown RBP13.37□□□□□ -0.27
PSEN1-221ENST00000557293 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms