RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ABLIM1O14639 778 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 MAFGO15525 162 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 MAP3K7O43318 606 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 TOP3BO95985 862 aaKnown RBP11.87□□□□□ -0.51
SRP54-213ENST00000556994 APOC2P02655 101 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 ARL2P36404 184 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 POLE2P56282 527 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 FSTL1Q12841 308 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 CAPSQ13938 189 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 DPH6Q7L8W6 267 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 FAM83AQ86UY5 434 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 CCNJLQ8IV13 435 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 THNSL1Q8IYQ7 743 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.87□□□□□ -0.51
SRP54-213ENST00000556994 NSUN6Q8TEA1 469 aaKnown RBP11.87□□□□□ -0.51
SRP54-213ENST00000556994 SLC7A3Q8WY07 619 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 THTPAQ9BU02 230 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 DHX33Q9H6R0 707 aaKnown RBP11.87□□□□□ -0.51
SRP54-213ENST00000556994 ZNF302Q9NR11 478 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 RAB6BQ9NRW1 208 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 H7C0C1 242 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 USP1O94782 785 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 ATG7O95352 703 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 BAG2O95816 211 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 PIGRP01833 764 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 OATP04181 439 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 ERBB2P04626 1255 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 ZCCHC18P0CG32 403 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 CALRP27797 417 aaKnown RBP11.87□□□□□ -0.51
SRP54-213ENST00000556994 ATP5OP48047 213 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 ALDH18A1P54886 795 aaKnown RBP11.87□□□□□ -0.51
SRP54-213ENST00000556994 AQP5P55064 265 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 IRX4P78413 519 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 MRPS5P82675 430 aaKnown RBP11.87□□□□□ -0.51
SRP54-213ENST00000556994 ROR1Q01973 937 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 CHI3L2Q15782 390 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 ZNF699Q32M78 642 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 ZCCHC23Q6ZST2 131 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 BRSK2Q8IWQ3 736 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 CCDC110Q8TBZ0 833 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 TTC1Q99614 292 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 ZNF518BQ9C0D4 1074 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 USP18Q9UMW8 372 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 PCDHGC3Q9UN70 934 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 CAPN14A8MX76 684 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 I3L4J1 428 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 KRT19P08727 400 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 SRGAP2CP0DJJ0 459 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 CDH5P33151 784 aaPredicted RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 ASPAP45381 313 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 BIRC2Q13490 618 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 TTC39BQ5VTQ0 682 aaPredicted RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 RIPOR1Q6ZS17 1223 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 SLC26A11Q86WA9 606 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 XYLT1Q86Y38 959 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 WDR49Q8IV35 697 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 SMC1BQ8NDV3 1235 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 CFAP61Q8NHU2 1237 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 E2F7Q96AV8 911 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 PANX3Q96QZ0 392 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 PEBP4Q96S96 227 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 ZNF184Q99676 751 aaPredicted RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 PHACTR1Q9C0D0 580 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 QTRT2Q9H974 415 aaKnown RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 SMYD2Q9NRG4 433 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 ZNF212Q9UDV6 495 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 TRPC5Q9UL62 973 aaPredicted RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 FZD1Q9UP38 647 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 EFR3BQ9Y2G0 817 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 PLLPQ9Y342 182 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 MEI4A8MW99 385 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 SMAPO00193 183 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 TRUB2O95900 331 aaKnown RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 POLR2BP30876 1174 aaKnown RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 CDH6P55285 790 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 MAP3K10Q02779 954 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 UBAP2LQ14157 1087 aaKnown RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 KCNJ11Q14654 390 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 TAZQ16635 292 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 CDO1Q16878 200 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 DUOXA2Q1HG44 320 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 AP1ARQ63HQ0 302 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 TMPRSS6Q8IU80 811 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 SCUBE1Q8IWY4 988 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 GATA6Q92908 595 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 RILPQ96NA2 401 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 EBF4Q9BQW3 602 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 ASCC2Q9H1I8 757 aaPredicted RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 MMADHCQ9H3L0 296 aaPredicted RBP11.86□□□□□ -0.51
SRP54-213ENST00000556994 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.86□□□□□ -0.51
SRP54-213ENST00000556994 TTLL3Q9Y4R7 772 aa11.86□□□□□ -0.51
SRP54-213ENST00000556994 KCNN4O15554 427 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 FAM189A1O60320 539 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 GRAP2O75791 330 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 EGFRP00533 1210 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 C1QAP02745 245 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 ANPEPP15144 967 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 ABCD1P33897 745 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms