RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 ACAP1Q15027 740 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 EFTUD2Q15029 972 aaKnown RBP eCLIP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 TMED2Q15363 201 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 STILQ15468 1287 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 SYCP2LQ5T4T6 812 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 ZBED8Q8IZ13 594 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 PQLC3Q8N755 202 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 SPATA18Q8TC71 538 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 SLC2A14Q8TDB8 520 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 RSAD2Q8WXG1 361 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 CENPTQ96BT3 561 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 ZNF317Q96PQ6 595 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 OSBPL7Q9BZF2 842 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 PCDH18Q9HCL0 1135 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 HESX1Q9UBX0 185 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 LGALS13Q9UHV8 139 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 NAALADL1Q9UQQ1 740 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 CLUHO75153 1309 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 TMEM120BA0PK00 339 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 C5orf60A6NFR6 353 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 CLDN5O00501 218 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 TCEA3O75764 348 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 PIAS1O75925 651 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 C6orf222P0C671 652 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 SETSIPP0DME0 302 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 RBP3P10745 1247 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 GNL1P36915 607 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 AFF1P51825 1210 aaKnown RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 GPX6P59796 221 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 ADCY1Q08828 1119 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 TRIM32Q13049 653 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 PDIA2Q13087 525 aaKnown RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 CRHR2Q13324 411 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 NOMO1Q15155 1222 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 CROCCP2Q86T23 111 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 UNC93AQ86WB7 457 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 ADGRF2Q8IZF7 708 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 ANKRD42Q8N9B4 389 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 NAT8LQ8N9F0 302 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 TTC13Q8NBP0 860 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 ZNF560Q96MR9 790 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 ZIC5Q96T25 663 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 FOXP3Q9BZS1 431 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 STMN4Q9H169 189 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 SNX25Q9H3E2 840 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 FAM124BQ9H5Z6 455 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 RSAD1Q9HA92 442 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 INTS9Q9NV88 658 aaKnown RBP10.58□□□□□ -0.72
TMEM260-211ENST00000556648 SHOC2Q9UQ13 582 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 CDY2AQ9Y6F7 541 aa10.58□□□□□ -0.72
TMEM260-211ENST00000556648 MCF2LO15068 1137 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 PGK1P00558 417 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 CD4P01730 458 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 ABHD2P08910 425 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 CTSHP09668 335 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 SDC4P31431 198 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 TAF6P49848 677 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 ROR1Q01973 937 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 BST2Q10589 180 aaKnown RBP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 IRF5Q13568 498 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 PCBP1Q15365 356 aaKnown RBP eCLIP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 TWF2Q6IBS0 349 aaKnown RBP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 CXCL17Q6UXB2 119 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 LIMS2Q7Z4I7 341 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 LRRC34Q8IZ02 419 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 CCDC33Q8N5R6 958 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 PLD5Q8N7P1 536 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 PCDH19Q8TAB3 1148 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 MRRFQ96E11 262 aaKnown RBP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 CHMP6Q96FZ7 201 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 SEC16BQ96JE7 1060 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 RNF157Q96PX1 679 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 VPS37BQ9H9H4 285 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 UBN1Q9NPG3 1134 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 GDAP2Q9NXN4 497 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 GABRQQ9UN88 632 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 A0A087WUV0 522 aaPredicted RBP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 POC1B-GALNT4F8VUJ3 575 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 H7C0C1 242 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 BEST1O76090 585 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 SLC10A3P09131 477 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 ATP5OP48047 213 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 BCAT1P54687 386 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 LILRA4P59901 499 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 SPRED3Q2MJR0 410 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 ANKRD20A8PQ5CZ79 823 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 KIAA0319Q5VV43 1072 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 GDF6Q6KF10 455 aaPredicted RBP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 RGMBQ6NW40 437 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 DARS2Q6PI48 645 aaKnown RBP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 TAOK1Q7L7X3 1001 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 SAPCD2Q86UD0 394 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 PPIL6Q8IXY8 311 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 SRRM1Q8IYB3 904 aaKnown RBP10.57□□□□□ -0.72
TMEM260-211ENST00000556648 CRYBG2Q8N1P7 616 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 CCDC185Q8N715 623 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 ANKRD52Q8NB46 1076 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 APPL2Q8NEU8 664 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 LPPQ93052 612 aa10.57□□□□□ -0.72
TMEM260-211ENST00000556648 KATNAL1Q9BW62 490 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms