RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PPP1R14CQ8TAE6 165 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 GTF3C6Q969F1 213 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 RPL10LQ96L21 214 aaKnown RBP5.69□□□□□ -1.5
SRP54-211ENST00000556445 UBXN10Q96LJ8 280 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 FAM193BQ96PV7 902 aaPredicted RBP5.69□□□□□ -1.5
SRP54-211ENST00000556445 CRAMP1Q96RY5 1269 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 MYCBPQ99417 103 aaPredicted RBP5.69□□□□□ -1.5
SRP54-211ENST00000556445 TBCBQ99426 244 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 NOL10Q9BSC4 688 aaKnown RBP5.69□□□□□ -1.5
SRP54-211ENST00000556445 OSBPL6Q9BZF3 934 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 TMPRSS5Q9H3S3 457 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 FAM204AQ9H8W3 233 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 ARFGAP3Q9NP61 516 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 EMC7Q9NPA0 242 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 PIH1D3Q9NQM4 214 aaKnown RBP5.69□□□□□ -1.5
SRP54-211ENST00000556445 LMBRD1Q9NUN5 540 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 RAI14Q9P0K7 980 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 HECAQ9UBI9 543 aaPredicted RBP5.69□□□□□ -1.5
SRP54-211ENST00000556445 FEZ2Q9UHY8 353 aaPredicted RBP5.69□□□□□ -1.5
SRP54-211ENST00000556445 MRFAP1Q9Y605 127 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 MYH13Q9UKX3 1938 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 A0A1B0GUL6 1792 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 MYPNQ86TC9 1320 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 LAMA4Q16363 1823 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 BRWD3Q6RI45 1802 aa5.69□□□□□ -1.5
SRP54-211ENST00000556445 CCDC88AQ3V6T2 1871 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 ERICH2A1L162 156 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 H3BQV1 296 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 CPLX1O14810 134 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 OFD1O75665 1012 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 TOX4O94842 621 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 PCDH8O95206 1070 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 AMHP03971 560 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 SLC3A2P08195 630 aaKnown RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 PFKMP08237 780 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 VSIG10L2P0DP72 767 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 GYS1P13807 737 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 TACR2P21452 398 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 ACRV1P26436 265 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 TM4SF1P30408 202 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 TDO2P48775 406 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 RCAN1P53805 252 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 TNFAIP2Q03169 654 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 PPP2R5BQ15173 497 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 TXNRD1Q16881 649 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 CRY2Q49AN0 593 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 DGKKQ5KSL6 1271 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 GPATCH4Q5T3I0 446 aaKnown RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 NAA16Q6N069 864 aaPredicted RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 SWSAP1Q6NVH7 229 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 MFSD6Q6ZSS7 791 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 GAREM2Q75VX8 874 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 FASTKD5Q7L8L6 764 aaKnown RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 PTF1AQ7RTS3 328 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 MB21D2Q8IYB1 491 aaPredicted RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 D2HGDHQ8N465 521 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 IPO4Q8TEX9 1081 aaKnown RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 ATRIPQ8WXE1 791 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 ANP32BQ92688 251 aaKnown RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 HDAC2Q92769 488 aaKnown RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 CELF1Q92879 486 aaKnown RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 EXTL1Q92935 676 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 RSRC1Q96IZ7 334 aaKnown RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 FAM84BQ96KN1 310 aaPredicted RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 ACO2Q99798 780 aaKnown RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 SCAND2PQ9GZW5 306 aaPredicted RBP5.68□□□□□ -1.5
SRP54-211ENST00000556445 VPS11Q9H270 941 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 ATP6V0A4Q9HBG4 840 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 TLR9Q9NR96 1032 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.68□□□□□ -1.5
SRP54-211ENST00000556445 MKS1Q9NXB0 559 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 SYNPO2Q9UMS6 1093 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 CRYL1Q9Y2S2 319 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 SH3BP1Q9Y3L3 701 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 SLC4A4Q9Y6R1 1079 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 SALL1Q9NSC2 1324 aa5.68□□□□□ -1.5
SRP54-211ENST00000556445 RGPD3A6NKT7 1758 aaPredicted RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 RGPD4Q7Z3J3 1758 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 MYO5AQ9Y4I1 1855 aaKnown RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 CCDC196A0A1B0GTZ2 297 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 VPS37CA5D8V6 355 aaPredicted RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 PABPN1LA6NDY0 278 aaKnown RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 LARGE1O95461 756 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 MYBP10242 640 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 GAAP10253 952 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 C6P13671 934 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 PDIA3P30101 505 aaKnown RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 ALDH1B1P30837 517 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 HOXD12P35452 270 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 PPM1AP35813 382 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 LIFRP42702 1097 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 UBE2HP62256 183 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 KRT83P78385 493 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 PKP1Q13835 747 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 USP39Q53GS9 565 aaKnown RBP5.67□□□□□ -1.5
SRP54-211ENST00000556445 CCDC178Q5BJE1 867 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 ATAT1Q5SQI0 421 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 AKNAD1Q5T1N1 836 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 PRR5LQ6MZQ0 368 aa5.67□□□□□ -1.5
SRP54-211ENST00000556445 C4orf50Q6ZRC1 276 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms