RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GBP1P32455 592 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 RFC5P40937 340 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 PTENP60484 403 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 AP1B1Q10567 949 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 STRN3Q13033 797 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 CBLBQ13191 982 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TTMPQ5BVD1 217 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 CELF3Q5SZQ8 465 aaKnown RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 C6orf183Q5T699 404 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 NAA35Q5VZE5 725 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 HIBCHQ6NVY1 386 aaPredicted RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 NPAS4Q8IUM7 802 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TOR1AIP2Q8NFQ8 470 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ATP8B4Q8TF62 1192 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 IFT81Q8WYA0 676 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SEPT1Q8WYJ6 367 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 CATSPER2Q96P56 530 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SMAD5Q99717 465 aaKnown RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TUBA1CQ9BQE3 449 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ZSWIM1Q9BR11 485 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TTPALQ9BTX7 342 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 TAF1DQ9H5J8 278 aaPredicted RBP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.32□□□□□ -1.56
TMEM260-210ENST00000556422 CTTNBP2NLQ9P2B4 639 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 ATP11BQ9Y2G3 1177 aa5.32□□□□□ -1.56
TMEM260-210ENST00000556422 HTR3EA5X5Y0 456 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 GJB1P08034 283 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 TNNI1P19237 187 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 HADHAP40939 763 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 ATP5OP48047 213 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 MRPS5P82675 430 aaKnown RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 UAP1Q16222 522 aaPredicted RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 CLEC16AQ2KHT3 1053 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 C2CD6Q53TS8 623 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 METTL11BQ5VVY1 283 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 ANGPTL8Q6UXH0 198 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 DNAJB7Q7Z6W7 309 aaPredicted RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 USP37Q86T82 979 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 LRRC71Q8N4P6 559 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 EIF1ADQ8N9N8 165 aaKnown RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 KCT2Q8NC54 265 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF564Q8TBZ8 553 aaPredicted RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 NAF1Q96HR8 494 aaKnown RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 MAML3Q96JK9 1138 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 NUP85Q9BW27 656 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 SLITRK6Q9H5Y7 841 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 SYNDIG1Q9H7V2 258 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 KIAA1586Q9HCI6 787 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 C12orf4Q9NQ89 552 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 PDGFCQ9NRA1 345 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 HACD3Q9P035 362 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 ATXN10Q9UBB4 475 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 LAMP5Q9UJQ1 280 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 CNTN6Q9UQ52 1028 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 TCRBV7S2A1N4TA0A589 114 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 KIAA0391O15091 583 aaKnown RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 PIP5K1CO60331 668 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 SLC25A27O95847 323 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 CYP1A1P04798 512 aaPredicted RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 IQCF3P0C7M6 154 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 ETFBP38117 255 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 NR2C2P49116 596 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 MTTPP55157 894 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 TUBA4AP68366 448 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 CENPCQ03188 943 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 SIX1Q15475 284 aaPredicted RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 NUGGCQ68CJ6 796 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 ACAD10Q6JQN1 1059 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 PPP1R2P3Q6NXS1 205 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 B4GALNT4Q76KP1 1039 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 ENOSF1Q7L5Y1 443 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 ADAT2Q7Z6V5 191 aaKnown RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 GALNT15Q8N3T1 639 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 UBR7Q8N806 425 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 BCL7CQ8WUZ0 217 aaPredicted RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 TRAPPC12Q8WVT3 735 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 CGRRF1Q99675 332 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 MSTO1Q9BUK6 570 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 MRPL9Q9BYD2 267 aaKnown RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 PPP1R12CQ9BZL4 782 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 POLMQ9NP87 494 aaPredicted RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 C1orf112Q9NSG2 853 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 PCDHA3Q9Y5H8 950 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 MROH7Q68CQ1 1323 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 A0A1B0GVG6 124 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 MEFVO15553 781 aaPredicted RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 RASGRP1O95267 797 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 CST3P01034 146 aaPredicted RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 CYP2C8P10632 490 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 PYGMP11217 842 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 PROZP22891 400 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 EPHX2P34913 555 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 HSPA9P38646 679 aaKnown RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 HAAOP46952 286 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 MASP1P48740 699 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 LAMTOR4Q0VGL1 99 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 MESDQ14696 234 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 PKN2Q16513 984 aaKnown RBP5.31□□□□□ -1.56
TMEM260-210ENST00000556422 C6orf118Q5T5N4 469 aa5.31□□□□□ -1.56
TMEM260-210ENST00000556422 LDLRAD1Q5T700 205 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms