RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 STK32AQ8WU08 396 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 TRMT2BQ96GJ1 504 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 MYRFLQ96LU7 910 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 CCDC42Q96M95 316 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 C11orf70Q9BRQ4 267 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 SLC4A5Q9BY07 1137 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 SLITRK6Q9H5Y7 841 aa14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 WDR6Q9NNW5 1121 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-208ENST00000556412 ZNF197O14709 1029 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 AKR1B10O60218 316 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 GABBR2O75899 941 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 ERBB2P04626 1255 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 CDC25CP30307 473 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 CDH5P33151 784 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 CCR2P41597 374 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 SNX16P57768 344 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 OR6B2Q6IFH4 312 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 PHLDB2Q86SQ0 1253 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 DNAAF5Q86Y56 855 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 ITFG1Q8TB96 612 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 CLEC4CQ8WTT0 213 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 PANX2Q96RD6 677 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 TTLL2Q9BWV7 592 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 LRRC3Q9BY71 257 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 POMKQ9H5K3 350 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 NHEJ1Q9H9Q4 299 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 IL21Q9HBE4 155 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 TRPC7Q9HCX4 862 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 TAS2R14Q9NYV8 317 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 TRPM5Q9NZQ8 1165 aa14.77□□□□□ -0.05
VIPAS39-208ENST00000556412 MBTPS2O43462 519 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 FGF19O95750 216 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 UNGP13051 313 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 GSDMDP57764 484 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 GFPT1Q06210 699 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 TEAD2Q15562 447 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 LEXMQ3ZCV2 418 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 PTCRAQ6ISU1 281 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 GAREM2Q75VX8 874 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 TMEM110Q86TL2 294 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 OLIG1Q8TAK6 271 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 SHKBP1Q8TBC3 707 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 MRPS31Q92665 395 aaKnown RBP14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 NECTIN4Q96NY8 510 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 CNGB3Q9NQW8 809 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 COMMD8Q9NX08 183 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 THEGQ9P2T0 379 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 NAGPAQ9UK23 515 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 SCML2Q9UQR0 700 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 USP3Q9Y6I4 520 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 A0A087X0T9 212 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 A0A1W2PQH9 124 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 GOLGA8SH3BPF8 625 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 NRG2O14511 850 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 PAPSS1O43252 624 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 PAPLNO95428 1278 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 F11P03951 625 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 FAM228BP0C875 321 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 CEBPBP17676 345 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 EPHA5P54756 1037 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 CENPCQ03188 943 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 ARHGAP15Q53QZ3 475 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 STXBP5Q5T5C0 1151 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 ACAD10Q6JQN1 1059 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 PDZD8Q8NEN9 1154 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 GOLGA1Q92805 767 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 FAM149B1Q96BN6 582 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 C18orf8Q96DM3 657 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 TLR8Q9NR97 1041 aaKnown RBP14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 SPTLC3Q9NUV7 552 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 IL37Q9NZH6 218 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 ADAM22Q9P0K1 906 aa14.76□□□□□ -0.05
VIPAS39-208ENST00000556412 EYSQ5T1H1 3165 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 SSU72P8A0A1W2PR75 194 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 TADA3O75528 432 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 FBXO21O94952 628 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 PTMAP06454 111 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 MMP8P22894 467 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 GBP2P32456 591 aaPredicted RBP14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 PGFP49763 221 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 DAOAP59103 153 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 YWHAGP61981 247 aaKnown RBP eCLIP14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 MRPS5P82675 430 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 PRSS36Q5K4E3 855 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 CCDC122Q5T0U0 273 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 GPR158Q5T848 1215 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 TXNDC8Q6A555 127 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 FAM183BPQ6ZVS7 135 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 TMEM150AQ86TG1 271 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 SUSD6Q92537 303 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 BAG1Q99933 345 aaPredicted RBP14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 NACA2Q9H009 215 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 NMUR1Q9HB89 426 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 CYLDQ9NQC7 956 aa14.75□□□□□ -0.05
VIPAS39-208ENST00000556412 MYO9BQ13459 2157 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 REV3LO60673 3130 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 FAM92AA1XBS5 289 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 ZNF840PA6NDX5 716 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 SOWAHDA6NJG2 315 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms