RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 RAD54LQ92698 747 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 NUDT11Q96G61 164 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 SPAG5Q96R06 1193 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 OSBPL9Q96SU4 736 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 MMS19Q96T76 1030 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 TMEM47Q9BQJ4 181 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 LSM14BQ9BX40 385 aaKnown RBP4.76□□□□□ -1.65
ATXN3-241ENST00000556374 CAPS2Q9BXY5 557 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 TTYH3Q9C0H2 523 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 TMEM60Q9H2L4 133 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 ZCCHC17Q9NP64 241 aaKnown RBP4.76□□□□□ -1.65
ATXN3-241ENST00000556374 SLC39A2Q9NP94 309 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 FAM207AQ9NSI2 230 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-241ENST00000556374 CEP72Q9P209 647 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 HDAC6Q9UBN7 1215 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 RSPH14Q9UHP6 348 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 FEZ2Q9UHY8 353 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-241ENST00000556374 FBXO10Q9UK96 956 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 REXO2Q9Y3B8 237 aaKnown RBP4.76□□□□□ -1.65
ATXN3-241ENST00000556374 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATXN3-241ENST00000556374 COL4A3BPQ9Y5P4 624 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 MYH7BA7E2Y1 1941 aa4.76□□□□□ -1.65
ATXN3-241ENST00000556374 CDK5RAP2Q96SN8 1893 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 SSC5DA1L4H1 1573 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 CACNA1AO00555 2505 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 SCN9AQ15858 1988 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 OVOL3O00110 214 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 CETN3O15182 167 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 GSTA4O15217 222 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 SRGAP2O75044 1071 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 TBCAO75347 108 aaKnown RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 UFL1O94874 794 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ERLIN2O94905 339 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 CNOT4O95628 575 aaKnown RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 FSHBP01225 129 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 GOLGA8HP0CJ92 632 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 KLRK1P26718 216 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ANXA13P27216 316 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ALDH1B1P30837 517 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 HNRNPH3P31942 346 aaKnown RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 MATR3P43243 847 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 MRPL12P52815 198 aaKnown RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 GNGT1P63211 74 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 PFKPQ01813 784 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 CXCL9Q07325 125 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 KLHL30Q0D2K2 578 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 IFRD2Q12894 506 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 COASYQ13057 564 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 USP10Q14694 798 aaKnown RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 CLUL1Q15846 466 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 NAALADL2Q58DX5 795 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ZMAT1Q5H9K5 638 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ZC3H12BQ5HYM0 836 aaKnown RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 GPATCH4Q5T3I0 446 aaKnown RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 CENPPQ6IPU0 288 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 STXBP4Q6ZWJ1 553 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 B4GALNT4Q76KP1 1039 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ZNF572Q7Z3I7 529 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 SCUBE1Q8IWY4 988 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 GSPT2Q8IYD1 628 aaKnown RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 CELF2-AS1Q8N7Q2 184 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 KIAA0895Q8NCT3 520 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 SPATA4Q8NEY3 305 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 SYN2Q92777 582 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 CAVIN3Q969G5 261 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 FAM122AQ96E09 287 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 DYNLL2Q96FJ2 89 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ZNF333Q96JL9 665 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 WWC2-AS2Q96NR7 200 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ZNF747Q9BV97 191 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 TMX4Q9H1E5 349 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ZHX3Q9H4I2 956 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 VAT1LQ9HCJ6 419 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ARHGEF4Q9NR80 690 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 AGPAT5Q9NUQ2 364 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 PANK4Q9NVE7 773 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 SWAP70Q9UH65 585 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 DDX25Q9UHL0 483 aaKnown RBP4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ZFP69BQ9UJL9 534 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 PTPN22Q9Y2R2 807 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 MSRB2Q9Y3D2 182 aa4.75□□□□□ -1.65
ATXN3-241ENST00000556374 ATP8B3O60423 1300 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 FRMPD2Q68DX3 1309 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 MYO3BQ8WXR4 1341 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 ATXN2Q99700 1313 aaKnown RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 GOLGA6L10A0A0M3HER8 536 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 PMS2P1A4D2B8 440 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 HMGB1P1B2RPK0 211 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 H0YHG0 523 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 CES2O00748 559 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 NDUFAB1O14561 156 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 PJA2O43164 708 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 PRODHO43272 600 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 N4BP1O75113 896 aaKnown RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 FLOT1O75955 427 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 HEXIM1O94992 359 aaKnown RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 LCA5LO95447 670 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 TTLL1O95922 423 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms