RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 SLC2A7Q6PXP3 512 aa6.18□□□□□ -1.42
PRPF39-209ENST00000556353 RAB11FIP4Q86YS3 637 aa6.18□□□□□ -1.42
PRPF39-209ENST00000556353 CNGA4Q8IV77 575 aa6.18□□□□□ -1.42
PRPF39-209ENST00000556353 KIAA0319LQ8IZA0 1049 aa6.18□□□□□ -1.42
PRPF39-209ENST00000556353 MAML1Q92585 1016 aa6.18□□□□□ -1.42
PRPF39-209ENST00000556353 SPSB4Q96A44 273 aa6.18□□□□□ -1.42
PRPF39-209ENST00000556353 PRSS22Q9GZN4 317 aa6.18□□□□□ -1.42
PRPF39-209ENST00000556353 XPNPEP3Q9NQH7 507 aa6.18□□□□□ -1.42
PRPF39-209ENST00000556353 NOB1Q9ULX3 412 aaKnown RBP6.18□□□□□ -1.42
PRPF39-209ENST00000556353 THRAP3Q9Y2W1 955 aaKnown RBP6.18□□□□□ -1.42
PRPF39-209ENST00000556353 KCNU1A8MYU2 1149 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 CES2O00748 559 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 GKP32189 559 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 MMP13P45452 471 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 ALDH5A1P51649 535 aaPredicted RBP6.17□□□□□ -1.42
PRPF39-209ENST00000556353 CNN3Q15417 329 aaKnown RBP6.17□□□□□ -1.42
PRPF39-209ENST00000556353 MINDY4Q4G0A6 757 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 RNASE12Q5GAN4 147 aaKnown RBP6.17□□□□□ -1.42
PRPF39-209ENST00000556353 SWSAP1Q6NVH7 229 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 SFTPA1Q8IWL2 248 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 CHPFQ8IZ52 775 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 OR56A3Q8NH54 315 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 DNAJB14Q8TBM8 379 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 C22orf23Q9BZE7 217 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 PDGFCQ9NRA1 345 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 C1orf112Q9NSG2 853 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 USP22Q9UPT9 525 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 TBC1D30Q9Y2I9 924 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 CDY1Q9Y6F8 540 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 USP19O94966 1318 aa6.17□□□□□ -1.42
PRPF39-209ENST00000556353 CYP2D7A0A087X1C5 515 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 CFAP69A5D8W1 941 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 MBD3L4A6NDZ8 208 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-209ENST00000556353 MBD3L3A6NE82 208 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-209ENST00000556353 SRGAP2O75044 1071 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 RASAL1O95294 804 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 FGAP02671 866 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 CYP2A6P11509 494 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-209ENST00000556353 BRAFP15056 766 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 EPHA3P29320 983 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 MTHFSP49914 203 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 SUMO3P55854 103 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-209ENST00000556353 FAM102BQ5T8I3 360 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 CACHD1Q5VU97 1274 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 ZDHHC24Q6UX98 284 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-209ENST00000556353 FCRL4Q96PJ5 515 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 FYTTD1Q96QD9 318 aaKnown RBP6.16□□□□□ -1.42
PRPF39-209ENST00000556353 MMS19Q96T76 1030 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 FAM204AQ9H8W3 233 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 SACM1LQ9NTJ5 587 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 TPCN1Q9ULQ1 816 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 DRG1Q9Y295 367 aaKnown RBP6.16□□□□□ -1.42
PRPF39-209ENST00000556353 WDR17Q8IZU2 1322 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 ZNF521Q96K83 1311 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 FHAD1B1AJZ9 1412 aa6.16□□□□□ -1.42
PRPF39-209ENST00000556353 ADCY10Q96PN6 1610 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 LOC102723971A0A1B0GUV8 181 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 TRIM43BA6NCK2 446 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 ISM1B1AKI9 464 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 PYCARD-AS1I3L0S3 204 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 FRS3O43559 492 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 RGS10O43665 173 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 MOSPD3O75425 235 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 PMPCBO75439 489 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 GCATO75600 419 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 RASSF9O75901 435 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 SCGB1D2O95969 90 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 SFPQP23246 707 aaKnown RBP eCLIP6.15□□□□□ -1.42
PRPF39-209ENST00000556353 KLRC1P26715 233 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 DAZAP2Q15038 168 aaPredicted RBP6.15□□□□□ -1.42
PRPF39-209ENST00000556353 FAM187BQ17R55 369 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 APOA5Q6Q788 366 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 BCDIN3DQ7Z5W3 292 aaKnown RBP6.15□□□□□ -1.42
PRPF39-209ENST00000556353 MICU3Q86XE3 530 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 RAVER1Q8IY67 606 aaKnown RBP6.15□□□□□ -1.42
PRPF39-209ENST00000556353 ZNF366Q8N895 744 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 ADAMTS18Q8TE60 1221 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 TRIM43Q96BQ3 446 aaPredicted RBP6.15□□□□□ -1.42
PRPF39-209ENST00000556353 TRIM5Q9C035 493 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 STK32BQ9NY57 414 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 TUBA8Q9NY65 449 aaPredicted RBP6.15□□□□□ -1.42
PRPF39-209ENST00000556353 CPNE7Q9UBL6 633 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 L1RE1Q9UN81 338 aa6.15□□□□□ -1.42
PRPF39-209ENST00000556353 CUL7Q14999 1698 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 TCRBV5S1A1TA0A578 114 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 M0R3H8 397 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 CCP110O43303 1012 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 PRPF3O43395 683 aaKnown RBP6.14□□□□□ -1.43
PRPF39-209ENST00000556353 PHKG2P15735 406 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 UQCRC1P31930 480 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 PSG6Q00889 435 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 PPP2R5AQ15172 486 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 PLEKHG6Q3KR16 790 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 ARHGAP29Q52LW3 1261 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 DENND2CQ68D51 928 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 PTCHD4Q6ZW05 846 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 NMD3Q96D46 503 aaKnown RBP6.14□□□□□ -1.43
PRPF39-209ENST00000556353 FAM118BQ9BPY3 351 aa6.14□□□□□ -1.43
PRPF39-209ENST00000556353 VN1R3Q9BXE9 311 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms