RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 PGDP52209 483 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 BCAT1P54687 386 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 TPTEP56180 551 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 EEFSECP57772 596 aaKnown RBP4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 TMEM119Q4V9L6 283 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 L1TD1Q5T7N2 865 aaKnown RBP4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 CCDC181Q5TID7 509 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 Q6ZWC4 215 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 NOL8Q76FK4 1167 aaKnown RBP4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 PARS2Q7L3T8 475 aaKnown RBP4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 CCDC146Q8IYE0 955 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 RIPOR3Q96MK2 946 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 BBC3Q96PG8 261 aaPredicted RBP4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 LENG8Q96PV6 779 aaPredicted RBP4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 TIMP4Q99727 224 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 DHX36Q9H2U1 1008 aaKnown RBP4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 CHST12Q9NRB3 414 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 ARPP21Q9UBL0 812 aaPredicted RBP4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 DKK4Q9UBT3 224 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 PHTF1Q9UMS5 762 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 USP22Q9UPT9 525 aa4.33□□□□□ -1.72
SUPT16H-206ENST00000556309 ANO9A1A5B4 782 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 GCOM1H8Y6P7 765 aaPredicted RBP4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 ZNF213O14771 459 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 THAP12O43422 761 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 ONECUT2O95948 504 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 HARSP12081 509 aaKnown RBP4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 FGFR2P21802 821 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 FPR3P25089 353 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 CYP4F2P78329 520 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 PICALMQ13492 652 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 PMS2P11Q13670 270 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 FAM209BQ5JX69 171 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 HIBCHQ6NVY1 386 aaPredicted RBP4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 ANKRD16Q6P6B7 361 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 GLCCI1Q86VQ1 547 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 SKAP1Q86WV1 359 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 SDR16C5Q8N3Y7 309 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 FANCBQ8NB91 859 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 SMCR8Q8TEV9 937 aaPredicted RBP4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 IPCEF1Q8WWN9 437 aaPredicted RBP4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 SH3BP4Q9P0V3 963 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 PADI4Q9UM07 663 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 ADAMTS5Q9UNA0 930 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 SH2B3Q9UQQ2 575 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 HPSEQ9Y251 543 aa4.32□□□□□ -1.72
SUPT16H-206ENST00000556309 AQP7P3A6NL99 342 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 SMIM22K7EJ46 135 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 PSMD9O00233 223 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 FOXN3O00409 490 aaPredicted RBP4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 EXOC5O00471 708 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 CES2O00748 559 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 NDST3O95803 873 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 NPSP0C0P6 89 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 NHLRC4P0CG21 123 aaPredicted RBP4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 EPHA3P29320 983 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 MTHFSP49914 203 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 GATMP50440 423 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 ALDH5A1P51649 535 aaPredicted RBP4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 ELLP55199 621 aaPredicted RBP4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 TIRAPP58753 221 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 KRTAP10-9P60411 292 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 PSG6Q00889 435 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 EPHA10Q5JZY3 1008 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 COLEC12Q5KU26 742 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 SYCP2LQ5T4T6 812 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 MANEALQ5VSG8 457 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 CRTC1Q6UUV9 634 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 CLEC9AQ6UXN8 241 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 SLC29A4Q7RTT9 530 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 WDR53Q7Z5U6 358 aaPredicted RBP4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 TXLNBQ8N3L3 684 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 METTL25Q8N6Q8 603 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 VGLL2Q8N8G2 317 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 SARAFQ96BY9 339 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 REPS1Q96D71 796 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 CCDC138Q96M89 665 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 HIST1H2AAQ96QV6 131 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 VN1R3Q9BXE9 311 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 FSD1LQ9BXM9 530 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 HEYLQ9NQ87 328 aaPredicted RBP4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 GABRQQ9UN88 632 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 WNT6Q9Y6F9 365 aa4.31□□□□□ -1.72
SUPT16H-206ENST00000556309 EXOC3O60645 756 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 PMPCBO75439 489 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 INMTO95050 263 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 MYL4P12829 197 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 WT1P19544 449 aaPredicted RBP4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 ATICP31939 592 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 GKP32189 559 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 TM4SF4P48230 202 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 AK2P54819 239 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 PROK1P58294 105 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 TIAL1Q01085 375 aaKnown RBP eCLIP4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 ARL13BQ3SXY8 428 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 RNASE12Q5GAN4 147 aaKnown RBP4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 AARS2Q5JTZ9 985 aaKnown RBP4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 CCSAPQ6IQ19 270 aaPredicted RBP4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 USP49Q70CQ1 688 aa4.3□□□□□ -1.72
SUPT16H-206ENST00000556309 SRLQ86TD4 932 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms