RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 SNW1Q13573 536 aaKnown RBP9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 PUM1Q14671 1186 aaKnown RBP eCLIP9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 FAM171A1Q5VUB5 890 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 CDCA2Q69YH5 1023 aaPredicted RBP9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 GET4Q7L5D6 327 aaPredicted RBP9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 TMC3Q7Z5M5 1100 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 POU5F2Q8N7G0 328 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 PIGOQ8TEQ8 1089 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 SLC6A18Q96N87 628 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 FERD3LQ96RJ6 166 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 NELL2Q99435 816 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 HDAC8Q9BY41 377 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 TTC12Q9H892 705 aaPredicted RBP9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 CACNG4Q9UBN1 327 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 FBXO4Q9UKT5 387 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 PPT2Q9UMR5 302 aa9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 MTF2Q9Y483 593 aaPredicted RBP9.85□□□□□ -0.83
GTF2A1-204ENST00000556268 SF3B1O75533 1304 aaKnown RBP eCLIP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 SHISA7A6NL88 538 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 TMEM189-UBE2V1I3L0A0 370 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 ACKR2O00590 384 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 IMPDH2P12268 514 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 RBM25P49756 843 aaKnown RBP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 ELAVL2Q12926 359 aaKnown RBP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 SPECC1Q5M775 1068 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 PDXDC1Q6P996 788 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 ZC3H14Q6PJT7 736 aaKnown RBP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 MTSS1LQ765P7 747 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 CATSPER3Q86XQ3 398 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 KIAA2013Q8IYS2 634 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 DCLK2Q8N568 766 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 ZBTB44Q8NCP5 570 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 ST13P5Q8NFI4 369 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 ITFG1Q8TB96 612 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 POLR3FQ9H1D9 316 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 GPRC5CQ9NQ84 441 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 PRMT7Q9NVM4 692 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 SNTG2Q9NY99 539 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 DNMT3BQ9UBC3 853 aaKnown RBP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 ORC3Q9UBD5 711 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 BACE2Q9Y5Z0 518 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 NCOR2Q9Y618 2525 aa9.84□□□□□ -0.83
GTF2A1-204ENST00000556268 FANCMQ8IYD8 2048 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 MED19A0JLT2 244 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 BTBD18B2RXH4 712 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 DTNBO60941 627 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 C8AP07357 584 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 GLI1P08151 1106 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 TGM1P22735 817 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 OR1D2P34982 312 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 KRT2P35908 639 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 MAGEA9P43362 315 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 MLF2Q15773 248 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 PSMD5Q16401 504 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 CALCRLQ16602 461 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 XKR4Q5GH76 650 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 PPM1LQ5SGD2 360 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 AXDND1Q5T1B0 1012 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 ALKAL1Q6UXT8 129 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 DGLUCYQ7Z3D6 616 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 NT5DC4Q86YG4 428 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 MCPH1Q8NEM0 835 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 WASF1Q92558 559 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 POLR3CQ9BUI4 534 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 CCDC113Q9H0I3 377 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 PDZD7Q9H5P4 517 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 GDE1Q9NZC3 331 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 MTRRQ9UBK8 725 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 NOTCH4Q99466 2003 aa9.83□□□□□ -0.84
GTF2A1-204ENST00000556268 F5P12259 2224 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 ARHGEF37A1IGU5 675 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 CASTOR2A6NHX0 329 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 N4BP3O15049 544 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 CCL16O15467 120 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 TBC1D4O60343 1298 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 ECI2O75521 394 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 RECQL4O94761 1208 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 ABLIM3O94929 683 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 EDN1P05305 212 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 ZGLP1P0C6A0 271 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 RAC2P15153 192 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 CYP11B2P19099 503 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 ATP2B1P20020 1258 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 PFKPQ01813 784 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 TEKQ02763 1124 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 MAPK6Q16659 721 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 UPP1Q16831 310 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 ZBTB41Q5SVQ8 909 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 FBXW10Q5XX13 1052 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 MAEAQ7L5Y9 396 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 CEP57Q86XR8 500 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 ENOX1Q8TC92 643 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 LIN37Q96GY3 246 aaPredicted RBP9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 PPP1R10Q96QC0 940 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 PLA2G2FQ9BZM2 168 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 MKRN2Q9H000 416 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 C2orf40Q9H1Z8 148 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 TMEM60Q9H2L4 133 aa9.82□□□□□ -0.84
GTF2A1-204ENST00000556268 TUFT1Q9NNX1 390 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms