RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 LAMA3Q16787 3333 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 FAM92AA1XBS5 289 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 HHLA1C9JL84 531 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 TNFRSF10BO14763 440 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 MBTPS2O43462 519 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 AKR1B10O60218 316 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 IPO7O95373 1038 aaKnown RBP8.03□□□□□ -1.12
TDP1-214ENST00000556063 ABL1P00519 1130 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 CYP1A1P04798 512 aaPredicted RBP8.03□□□□□ -1.12
TDP1-214ENST00000556063 CALB1P05937 261 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 RALAP11233 206 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 GZMAP12544 262 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 SKILP12757 684 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 LCP1P13796 627 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 CHRNB2P17787 502 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 RGS7P49802 495 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 NOMO3P69849 1222 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 ADIGQ0VDE8 80 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 MTMR3Q13615 1198 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 CLEC16AQ2KHT3 1053 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 RAB41Q5JT25 222 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 NAA35Q5VZE5 725 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 E4F1Q66K89 784 aaPredicted RBP8.03□□□□□ -1.12
TDP1-214ENST00000556063 PM20D1Q6GTS8 502 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 PTCRAQ6ISU1 281 aaPredicted RBP8.03□□□□□ -1.12
TDP1-214ENST00000556063 ACAD10Q6JQN1 1059 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 TOGARAM2Q6ZUX3 1019 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 CCDC186Q7Z3E2 898 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 ZNF571Q7Z3V5 609 aaPredicted RBP8.03□□□□□ -1.12
TDP1-214ENST00000556063 TMEM110Q86TL2 294 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 ZDHHC17Q8IUH5 632 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 TMTC1Q8IUR5 882 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 GPIHBP1Q8IV16 184 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 HS6ST3Q8IZP7 471 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 SCAMP5Q8TAC9 235 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 ATXN2LQ8WWM7 1075 aaKnown RBP8.03□□□□□ -1.12
TDP1-214ENST00000556063 IRGQQ8WZA9 623 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 SUSD6Q92537 303 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 ACSF2Q96CM8 615 aaPredicted RBP8.03□□□□□ -1.12
TDP1-214ENST00000556063 C18orf8Q96DM3 657 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 TRIM11Q96F44 468 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 VCPIP1Q96JH7 1222 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 ULBP1Q9BZM6 244 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 NACA2Q9H009 215 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 SLITRK6Q9H5Y7 841 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 LUC7LQ9NQ29 371 aaKnown RBP8.03□□□□□ -1.12
TDP1-214ENST00000556063 TMEM30AQ9NV96 361 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 HCFC1R1Q9NWW0 138 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 GDE1Q9NZC3 331 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 WDR35Q9P2L0 1181 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 USP3Q9Y6I4 520 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 NCOR1O75376 2440 aa8.03□□□□□ -1.12
TDP1-214ENST00000556063 C2orf16Q68DN1 1984 aa8.02□□□□□ -1.12
TDP1-214ENST00000556063 PATJQ8NI35 1801 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 TRAV19A0A0A6YYK7 116 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 A0A1W2PRU2 124 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 ANKRD62A6NC57 917 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 GRXCR2A6NFK2 248 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 TULP2O00295 520 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 RTN2O75298 545 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 F11P03951 625 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 GLI1P08151 1106 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 CFHP08603 1231 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 USP17L7P0C7H9 530 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 UNGP13051 313 aaPredicted RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 DESP17661 470 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 MMP8P22894 467 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 GBP2P32456 591 aaPredicted RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 CYLC1P35663 651 aaPredicted RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 SCNN1AP37088 669 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 EIF4A3P38919 411 aaKnown RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 RPL34P49207 117 aaKnown RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 TUBP50607 506 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 USP46P62068 366 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 NTHL1P78549 312 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 MRPS5P82675 430 aaKnown RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 CENPCQ03188 943 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 ZNF268Q14587 947 aaPredicted RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 EFHC1Q5JVL4 640 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 PRSS36Q5K4E3 855 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 HECTD3Q5T447 861 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 GPR158Q5T848 1215 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 BTBD8Q5XKL5 378 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 HGSNATQ68CP4 663 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 OR6B2Q6IFH4 312 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 RSRC2Q7L4I2 434 aaKnown RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 GET4Q7L5D6 327 aaPredicted RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 PHF13Q86YI8 300 aaPredicted RBP8.02□□□□□ -1.13
TDP1-214ENST00000556063 TMC8Q8IU68 726 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 SCUBE3Q8IX30 993 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 CCDC170Q8IYT3 715 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 PLCD3Q8N3E9 789 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 WDTC1Q8N5D0 677 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 TC2NQ8N9U0 490 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 RNF139Q8WU17 664 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 CPA5Q8WXQ8 436 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 FAM149B1Q96BN6 582 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 CPXM1Q96SM3 734 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 SYT11Q9BT88 431 aa8.02□□□□□ -1.13
TDP1-214ENST00000556063 PHF7Q9BWX1 381 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms