RNA–Protein interactions for RNA: ENST00000556019.2

LINC01588-209, Transcript of long intergenic non-protein coding RNA 1588, human

TSL 3 BASIC

Gene LINC01588, Length 534 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01588-209	ENST00000556019	HOXD12	P35452	270 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	GRIK1	P39086	918 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	GRIA2	P42262	883 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	RBP5	P82980	135 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	DUOXA1	Q1HG43	343 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	LY6G5C	Q5SRR4	150 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	C19orf48	Q6RUI8	117 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	C4orf50	Q6ZRC1	276 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	DPH6	Q7L8W6	267 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	NOC3L	Q8WTT2	800 aa	Known RBP	11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	CACTIN	Q8WUQ7	758 aa	Known RBP	11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	CEP295NL	Q96MC4	621 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	MRPL45	Q9BRJ2	306 aa	Known RBP	11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	PCIF1	Q9H4Z3	704 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	DNAAF2	Q9NVR5	837 aa	Known RBP	11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	CALCOCO1	Q9P1Z2	691 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	CCDC39	Q9UFE4	941 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	EXOC7	Q9UPT5	735 aa		11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.17	□□□□□ -0.62
LINC01588-209	ENST00000556019		H0Y626	953 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	ARHGAP33	O14559	1287 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	TRIM16	O95361	564 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	CD2BP2	O95400	341 aa	Known RBP	11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	WARS	P23381	471 aa	Known RBP	11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	PDE6C	P51160	858 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	CYP27A1	Q02318	531 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	RPL6	Q02878	288 aa	Known RBP	11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	ZNF33A	Q06730	810 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	SCAP	Q12770	1279 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	TAF10	Q12962	218 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	SF3A1	Q15459	793 aa	Known RBP	11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	MDH1B	Q5I0G3	518 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	NAT16	Q8N8M0	369 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	MYCBPAP	Q8TBZ2	947 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	HPDL	Q96IR7	371 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	C8orf48	Q96LL4	319 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	BBC3	Q96PG8	261 aa	Predicted RBP	11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	ACCS	Q96QU6	501 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	ACOX2	Q99424	681 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	TRIM9	Q9C026	710 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	DPEP3	Q9H4B8	488 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	MRPL44	Q9H9J2	332 aa	Known RBP	11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	INTS13	Q9NVM9	706 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	IGSF10	Q6WRI0	2623 aa		11.16	□□□□□ -0.62
LINC01588-209	ENST00000556019	E2F8	A0AVK6	867 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	FRMD3	A2A2Y4	597 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	SLC9A3R1	O14745	358 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	HOXC11	O43248	304 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	AP5Z1	O43299	807 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	COCH	O43405	550 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	SH3BP5	O60239	455 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	GREM1	O60565	184 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	OPHN1	O60890	802 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	TULP3	O75386	442 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	ADH1C	P00326	375 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	CST3	P01034	146 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	MBL2	P11226	248 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	PDC	P20941	246 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	HOXD13	P35453	343 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	DPP6	P42658	865 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	WAS	P42768	502 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	PPP3CC	P48454	512 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	PGF	P49763	221 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	GFPT1	Q06210	699 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	ZNF423	Q2M1K9	1284 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	COL28A1	Q2UY09	1125 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	EGFLAM	Q63HQ2	1017 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	PDZD3	Q86UT5	571 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	TMEM25	Q86YD3	366 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	CBWD2	Q8IUF1	395 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	BBS7	Q8IWZ6	715 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	SYCP3	Q8IZU3	236 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	PGBD3	Q8N328	593 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	PNPLA1	Q8N8W4	532 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	GLIS3	Q8NEA6	775 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	CEP76	Q8TAP6	659 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	ADAMTS14	Q8WXS8	1223 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	ERLEC1	Q96DZ1	483 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	P2RY11	Q96G91	374 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	B3GNT5	Q9BYG0	378 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	ZNF518B	Q9C0D4	1074 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	SLC6A17	Q9H1V8	727 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	OLFML3	Q9NRN5	406 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	SEL1L	Q9UBV2	794 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	STK17A	Q9UEE5	414 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	PTPRB	P23467	1997 aa		11.15	□□□□□ -0.62
LINC01588-209	ENST00000556019	TBC1D3B	A6NDS4	549 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	CLDN5	O00501	218 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	TRIM66	O15016	1216 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	CBFA2T3	O75081	653 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	GCNT3	O95395	438 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	LDHA	P00338	332 aa	Known RBP	11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	ABL1	P00519	1130 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	TMEM191B	P0C7N4	346 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	FTH1P19	P0C7X4	201 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	HOXB2	P14652	356 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	IDE	P14735	1019 aa		11.14	□□□□□ -0.63
LINC01588-209	ENST00000556019	NDUFV2	P19404	249 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms