RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 BMT2Q1RMZ1 405 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 ANO7Q6IWH7 933 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 TMEM92Q6UXU6 159 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 HS2ST1Q7LGA3 356 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 C12orf56Q8IXR9 622 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 MYLPFQ96A32 169 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 ACDQ96AP0 544 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 CCDC127Q96BQ5 260 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 SLC22A12Q96S37 553 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 MMS19Q96T76 1030 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 CGRRF1Q99675 332 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 KIF9Q9HAQ2 790 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 FSCN3Q9NQT6 498 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 UXTQ9UBK9 157 aaPredicted RBP11.54□□□□□ -0.56
TDP1-212ENST00000555565 SERTAD1Q9UHV2 236 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 CFAP45Q9UL16 551 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 CDH9Q9ULB4 789 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 NME7Q9Y5B8 376 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 TNRC6BQ9UPQ9 1833 aaKnown RBP11.53□□□□□ -0.56
TDP1-212ENST00000555565 BPTFQ12830 3046 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
TDP1-212ENST00000555565 KLRC4O43908 158 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 SLFN14P0C7P3 912 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 BDNFP23560 247 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 OPRD1P41143 372 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 P2RY2P41231 377 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 ZNF77Q15935 545 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 CRY1Q16526 586 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 GAB4Q2WGN9 574 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 EML3Q32P44 896 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 VSTM1Q6UX27 236 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 C4orf50Q6ZRC1 276 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 SYT12Q8IV01 421 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 TMEFF1Q8IYR6 380 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 PLEKHO2Q8TD55 490 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 OSCP1Q8WVF1 389 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 RLN3Q8WXF3 142 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 PCED1BQ96HM7 432 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 CYP2S1Q96SQ9 504 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 MRPL45Q9BRJ2 306 aaKnown RBP11.53□□□□□ -0.56
TDP1-212ENST00000555565 TRPC7Q9HCX4 862 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 CGNQ9P2M7 1197 aaKnown RBP11.53□□□□□ -0.56
TDP1-212ENST00000555565 MAGEC2Q9UBF1 373 aaPredicted RBP11.53□□□□□ -0.56
TDP1-212ENST00000555565 PILRBQ9UKJ0 227 aa11.53□□□□□ -0.56
TDP1-212ENST00000555565 TACC1O75410 805 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 CD59P13987 128 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 GNL1P36915 607 aaPredicted RBP11.52□□□□□ -0.57
TDP1-212ENST00000555565 CASP4P49662 377 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 MYL6P60660 151 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 USP46P62068 366 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 FAM160A1Q05DH4 1040 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 MESP2Q0VG99 397 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 STK4Q13043 487 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 PSMD2Q13200 908 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 MTF1Q14872 753 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 MAPRE1Q15691 268 aaKnown RBP11.52□□□□□ -0.57
TDP1-212ENST00000555565 MAP7D1Q3KQU3 841 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 WDR72Q3MJ13 1102 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 C2orf27AQ580R0 203 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 CC2D1AQ6P1N0 951 aaPredicted RBP11.52□□□□□ -0.57
TDP1-212ENST00000555565 CEP57L1Q8IYX8 460 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 CPA6Q8N4T0 437 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 KIAA0895Q8NCT3 520 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 MYCBPAPQ8TBZ2 947 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 PAGE5Q96GU1 130 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 SPATA17Q96L03 361 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 NUSAP1Q9BXS6 441 aaKnown RBP11.52□□□□□ -0.57
TDP1-212ENST00000555565 XYLT2Q9H1B5 865 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 LINC00597Q9H2U6 94 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 SNX25Q9H3E2 840 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 DUS2Q9NX74 493 aaKnown RBP11.52□□□□□ -0.57
TDP1-212ENST00000555565 CACNA2D2Q9NY47 1150 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 GCNT4Q9P109 453 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 MMP17Q9ULZ9 603 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 WNT6Q9Y6F9 365 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 GON4LQ3T8J9 2241 aa11.52□□□□□ -0.57
TDP1-212ENST00000555565 TRAV19A0A0A6YYK7 116 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 A0A1B0GVL5 298 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 C2orf78A6NCI8 922 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 EXOC3O60645 756 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
TDP1-212ENST00000555565 CKMP06732 381 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 FAM163BP0C2L3 166 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 USP17L7P0C7H9 530 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 PFKFB1P16118 471 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 ITPKAP23677 461 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 GRIK1P39086 918 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 ZXDBP98169 803 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 CYP27A1Q02318 531 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 USP4Q13107 963 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 ZNF423Q2M1K9 1284 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 MDH1BQ5I0G3 518 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 CCNI2Q6ZMN8 369 aaPredicted RBP11.51□□□□□ -0.57
TDP1-212ENST00000555565 ARMCX6Q7L4S7 300 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 SFTPA1Q8IWL2 248 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 CCDC33Q8N5R6 958 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 ARL14EPQ8N8R7 260 aaPredicted RBP11.51□□□□□ -0.57
TDP1-212ENST00000555565 FSIP1Q8NA03 581 aa11.51□□□□□ -0.57
TDP1-212ENST00000555565 OR6B3Q8NGW1 331 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms