RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 YJEFN3A6XGL0 299 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 HIDE1A8MVS5 230 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 E7ENQ6 273 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 TNFRSF10BO14763 440 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 ZNF185O15231 689 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 SPOPO43791 374 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 PROSCO94903 275 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 ABLIM3O94929 683 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 CNPP09543 421 aaKnown RBP10.71□□□□□ -0.69
SRP54-208ENST00000555557 SPATA31D3P0C874 917 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 HAPLN1P10915 354 aaPredicted RBP10.71□□□□□ -0.69
SRP54-208ENST00000555557 TCF4P15884 667 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 PDGFRAP16234 1089 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 PSMA2P25787 234 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 C15orf59Q2T9L4 293 aaPredicted RBP10.71□□□□□ -0.69
SRP54-208ENST00000555557 RAB6CQ53S08 254 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 SH3PXD2AQ5TCZ1 1133 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 PLPP4Q5VZY2 271 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 SPATA31D4Q6ZUB0 917 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 SPPL2BQ8TCT7 592 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 GIPC2Q8TF65 315 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 RAB6CQ9H0N0 254 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 IP6K2Q9UHH9 426 aa10.71□□□□□ -0.69
SRP54-208ENST00000555557 NLRC5Q86WI3 1866 aa10.71□□□□□ -0.7
SRP54-208ENST00000555557 C2CD4BA6NLJ0 364 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 TRIM66O15016 1216 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 GRM6O15303 877 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 SLC34A2O95436 690 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 ZBED1O96006 694 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 TFE3P19532 575 aaPredicted RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 IRS1P35568 1242 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 SSR1P43307 286 aaKnown RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 MAGEA11P43364 429 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 MARCKSL1P49006 195 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 PGFP49763 221 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 DAOAP59103 153 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 USP46P62068 366 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 ATP11AP98196 1134 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 AMPD2Q01433 879 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 TAP1Q03518 808 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 SMARCB1Q12824 385 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 MTMR3Q13615 1198 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 CAMK1Q14012 370 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 RPS6KA1Q15418 735 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 CDO1Q16878 200 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 PAPD7Q5XG87 772 aaKnown RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 SLC26A9Q7LBE3 791 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 BHLHA9Q7RTU4 235 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 ARFGAP1Q8N6T3 406 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 MICAL1Q8TDZ2 1067 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 KRT35Q92764 455 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 CALR3Q96L12 384 aaKnown RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 C8orf48Q96LL4 319 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 PLVAPQ9BX97 442 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 NKX2-4Q9H2Z4 354 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 CYP4F11Q9HBI6 524 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 PNPLA8Q9NP80 782 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 CNGB3Q9NQW8 809 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 ENTPD7Q9NQZ7 604 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 AFF4Q9UHB7 1163 aaKnown RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 PCDHA11Q9Y5I1 949 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 USP3Q9Y6I4 520 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 TRIOBPQ9H2D6 2365 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 C5orf67F2Z3F1 127 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 DDX3YO15523 660 aaKnown RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 ATF2P15336 505 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 ATF6P18850 670 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 GPD1P21695 349 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 TAS2R40P59535 323 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 YWHAZP63104 245 aaKnown RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 RAB33AQ14088 237 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 CCDC14Q49A88 953 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 EFHC1Q5JVL4 640 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 SYPL2Q5VXT5 272 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 CC2D1AQ6P1N0 951 aaPredicted RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 DEFB106AQ8N104 65 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 NUP93Q8N1F7 819 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 COG1Q8WTW3 980 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 C2orf15Q8WU43 125 aaKnown RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 CD101Q93033 1021 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 HES6Q96HZ4 224 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 TGS1Q96RS0 853 aaKnown RBP10.7□□□□□ -0.7
SRP54-208ENST00000555557 ADAM33Q9BZ11 813 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 RXFP1Q9HBX9 757 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 TLR9Q9NR96 1032 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 FNIP2Q9P278 1114 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 SNX12Q9UMY4 172 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 RWDD3Q9Y3V2 267 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 SAR1BQ9Y6B6 198 aa10.7□□□□□ -0.7
SRP54-208ENST00000555557 KCNK3O14649 394 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 FBXO21O94952 628 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 FYNP06241 537 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 GJC1P36383 396 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 ZNF143P52747 638 aaPredicted RBP10.69□□□□□ -0.7
SRP54-208ENST00000555557 PITX1P78337 314 aaPredicted RBP10.69□□□□□ -0.7
SRP54-208ENST00000555557 PIGHQ14442 188 aaPredicted RBP10.69□□□□□ -0.7
SRP54-208ENST00000555557 ATP13A4Q4VNC1 1196 aa10.69□□□□□ -0.7
SRP54-208ENST00000555557 DCAF6Q58WW2 860 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms