RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 C16orf71Q8IYS4 520 aaPredicted RBP3.94□□□□□ -1.78
SRP54-207ENST00000555535 FBXL14Q8N1E6 418 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 WBP2Q969T9 261 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 RSPRY1Q96DX4 576 aa3.94□□□□□ -1.78
SRP54-207ENST00000555535 DCLK1O15075 740 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 CLSTN1O94985 981 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 FGAP02671 866 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 PIM1P11309 404 aaPredicted RBP3.93□□□□□ -1.78
SRP54-207ENST00000555535 ALDH7A1P49419 539 aaKnown RBP3.93□□□□□ -1.78
SRP54-207ENST00000555535 ADKP55263 362 aaKnown RBP3.93□□□□□ -1.78
SRP54-207ENST00000555535 E2F1Q01094 437 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 LARS2Q15031 903 aaKnown RBP3.93□□□□□ -1.78
SRP54-207ENST00000555535 PRTGQ2VWP7 1150 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 VSTM1Q6UX27 236 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.93□□□□□ -1.78
SRP54-207ENST00000555535 PPP1R3BQ86XI6 285 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 C3orf20Q8ND61 904 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 FAM46DQ8NEK8 389 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 MRPL46Q9H2W6 279 aaKnown RBP3.93□□□□□ -1.78
SRP54-207ENST00000555535 TNKSO95271 1327 aa3.93□□□□□ -1.78
SRP54-207ENST00000555535 SHTN1A0MZ66 631 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 AP4M1O00189 453 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 KATNA1O75449 491 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 AHSGP02765 367 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 CDKN1CP49918 316 aaPredicted RBP3.92□□□□□ -1.78
SRP54-207ENST00000555535 GUCY2FP51841 1108 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 SUMO2P61956 95 aaKnown RBP3.92□□□□□ -1.78
SRP54-207ENST00000555535 ITKQ08881 620 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 NOGQ13253 232 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 STIM1Q13586 685 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 EFCAB2Q5VUJ9 269 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 OSCP1Q8WVF1 389 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 TNPO1Q92973 898 aaKnown RBP3.92□□□□□ -1.78
SRP54-207ENST00000555535 SLITRK1Q96PX8 696 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 TUBB6Q9BUF5 446 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 TTYH3Q9C0H2 523 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 DECR2Q9NUI1 292 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 ABCF2Q9UG63 623 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 POLHQ9Y253 713 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 MMP24Q9Y5R2 645 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 MRFAP1Q9Y605 127 aa3.92□□□□□ -1.78
SRP54-207ENST00000555535 TRIP12Q14669 1992 aaPredicted RBP3.91□□□□□ -1.78
SRP54-207ENST00000555535 A0A087WYN8 130 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 CTIFO43310 598 aaKnown RBP3.91□□□□□ -1.78
SRP54-207ENST00000555535 CD63P08962 238 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 FGF2P09038 288 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 CPA2P48052 419 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 ENTPD1P49961 510 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 CYP1B1Q16678 543 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 AMOTQ4VCS5 1084 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 RANBP10Q6VN20 620 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 HEATR3Q7Z4Q2 680 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 PNMA8AQ86V59 439 aaPredicted RBP3.91□□□□□ -1.78
SRP54-207ENST00000555535 CAND1Q86VP6 1230 aaKnown RBP3.91□□□□□ -1.78
SRP54-207ENST00000555535 CPA6Q8N4T0 437 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 MTMR8Q96EF0 704 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 WDCPQ9H6R7 721 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 GAR1Q9NY12 217 aaKnown RBP3.91□□□□□ -1.78
SRP54-207ENST00000555535 WNT16Q9UBV4 365 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 NDRG4Q9ULP0 352 aaKnown RBP3.91□□□□□ -1.78
SRP54-207ENST00000555535 SHOC2Q9UQ13 582 aa3.91□□□□□ -1.78
SRP54-207ENST00000555535 ZNF432O94892 652 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 PDCP20941 246 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 HK3P52790 923 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 LILRA4P59901 499 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 EGR4Q05215 589 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 PTPN21Q16825 1174 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 ZNF793Q6ZN11 406 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 PRR18Q8N4B5 295 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 ASB5Q8WWX0 329 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 MYLK2Q9H1R3 596 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.9□□□□□ -1.79
SRP54-207ENST00000555535 PCDHA1Q9Y5I3 950 aa3.9□□□□□ -1.79
SRP54-207ENST00000555535 M0R3H8 397 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 PSMD9O00233 223 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 RHCEP18577 417 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 HDCP19113 662 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 CDK11BP21127 795 aaKnown RBP3.89□□□□□ -1.79
SRP54-207ENST00000555535 LRPAP1P30533 357 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 MAP2K6P52564 334 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 LTBQ06643 244 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 FAM50AQ14320 339 aaKnown RBP3.89□□□□□ -1.79
SRP54-207ENST00000555535 SEC23BQ15437 767 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 COL23A1Q86Y22 540 aaPredicted RBP3.89□□□□□ -1.79
SRP54-207ENST00000555535 MIB2Q96AX9 1013 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 PRR25Q96S07 402 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 SLC13A1Q9BZW2 595 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 TMX1Q9H3N1 280 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 SPC25Q9HBM1 224 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 SNX15Q9NRS6 342 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 PCDHA7Q9UN72 937 aa3.89□□□□□ -1.79
SRP54-207ENST00000555535 TTBK1Q5TCY1 1321 aaPredicted RBP3.89□□□□□ -1.79
SRP54-207ENST00000555535 SOCS5O75159 536 aa3.88□□□□□ -1.79
SRP54-207ENST00000555535 TYRP14679 529 aa3.88□□□□□ -1.79
SRP54-207ENST00000555535 TACR3P29371 465 aa3.88□□□□□ -1.79
SRP54-207ENST00000555535 EVA1CP58658 441 aa3.88□□□□□ -1.79
SRP54-207ENST00000555535 EXOSC9Q06265 439 aaKnown RBP3.88□□□□□ -1.79
SRP54-207ENST00000555535 SF3B4Q15427 424 aaKnown RBP eCLIP3.88□□□□□ -1.79
SRP54-207ENST00000555535 NADSYN1Q6IA69 706 aa3.88□□□□□ -1.79
SRP54-207ENST00000555535 DCDC5Q6ZRR9 648 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms