RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 KRT82Q9NSB4 513 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 TRIM10Q9UDY6 481 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 DOCK8Q8NF50 2099 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 NCOR1O75376 2440 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 F8VP50 259 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ZNF263O14978 683 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 EPHB6O15197 1021 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ATP1A1P05023 1023 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 HNRNPA1P09651 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 GJA1P17302 382 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 BRD2P25440 801 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ANXA13P27216 316 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 MTHFRP42898 656 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 PLA2G4AP47712 749 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 MAP3K7CLP57077 242 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 POLR2FP61218 127 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 GCNT1Q02742 428 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 SMARCB1Q12824 385 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 VEPH1Q14D04 833 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 LONRF2Q1L5Z9 754 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 KLHDC7AQ5VTJ3 777 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 SFMBT2Q5VUG0 894 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ZNF572Q7Z3I7 529 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 FUKQ8N0W3 1084 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ASB2Q96Q27 587 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 KCNK16Q96T55 309 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 FUT8Q9BYC5 575 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ACP6Q9NPH0 428 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 TMEM30AQ9NV96 361 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 AIPL1Q9NZN9 384 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 DNMT3BQ9UBC3 853 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ATP8B3O60423 1300 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 MYO16Q9Y6X6 1858 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 RCCD1A6NED2 376 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 FOXN3O00409 490 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 MAP2K7O14733 419 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 NOL4O94818 638 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 RHOP08100 348 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 FAM200BP0CF97 657 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 PTPN2P17706 415 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 ACO1P21399 889 aaKnown RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 GBP2P32456 591 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 MAGEA1P43355 309 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 RPL10AP62906 217 aaKnown RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 GPS2Q13227 327 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 DRAP1Q14919 205 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 TERF2Q15554 542 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 GOLGA7BQ2TAP0 167 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 PABPC1LQ4VXU2 614 aaKnown RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 SGO2Q562F6 1265 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 C10orf76Q5T2E6 689 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 HGSNATQ68CP4 663 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 PAQR9Q6ZVX9 377 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 PDZD4Q76G19 769 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 HDXQ7Z353 690 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 DNAJB7Q7Z6W7 309 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 CRYBG2Q8N1P7 616 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 TTC39CQ8N584 583 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 CMASQ8NFW8 434 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 UBA3Q8TBC4 463 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 ATXN2LQ8WWM7 1075 aaKnown RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 TCEAL4Q96EI5 215 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 SMARCD1Q96GM5 515 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 NECAB3Q96P71 396 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 SLC24A3Q9HC58 644 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 ZNF334Q9HCZ1 680 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 ASAH2Q9NR71 780 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 FAM50BQ9Y247 325 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 DAAM1Q9Y4D1 1078 aa10.41□□□□□ -0.74
PSEN1-213ENST00000555386 BZW2Q9Y6E2 419 aaKnown RBP10.41□□□□□ -0.74
PSEN1-213ENST00000555386 SLC38A8A6NNN8 435 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 CYP26A1O43174 497 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 THAP12O43422 761 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 BEST1O76090 585 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 SEC31AO94979 1220 aaKnown RBP10.4□□□□□ -0.74
PSEN1-213ENST00000555386 C1RP00736 705 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 PLEKP08567 350 aaPredicted RBP10.4□□□□□ -0.74
PSEN1-213ENST00000555386 UCHL3P15374 230 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 TCP1P17987 556 aaKnown RBP10.4□□□□□ -0.74
PSEN1-213ENST00000555386 FSHRP23945 695 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 ARID5AQ03989 594 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 SLC5A9Q2M3M2 681 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 MAP9Q49MG5 647 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 CFAP221Q4G0U5 840 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 BEND6Q5SZJ8 279 aaPredicted RBP10.4□□□□□ -0.74
PSEN1-213ENST00000555386 CYP4A22Q5TCH4 519 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 ENOSF1Q7L5Y1 443 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 UBR7Q8N806 425 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 TTC16Q8NEE8 873 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 ITFG1Q8TB96 612 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 TFAP2BQ92481 460 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 FUBP3Q96I24 572 aaKnown RBP eCLIP10.4□□□□□ -0.74
PSEN1-213ENST00000555386 FAXDC2Q96IV6 333 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 SMOQ99835 787 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 GANQ9H2C0 597 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 EPC1Q9H2F5 836 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 SLITRK6Q9H5Y7 841 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 ABCB6Q9NP58 842 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 MAFFQ9ULX9 164 aa10.4□□□□□ -0.74
PSEN1-213ENST00000555386 SNX12Q9UMY4 172 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms