RNA–Protein interactions for RNA: ENST00000555359.1

NSFL1C-211, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-211ENST00000555359 EXOC1Q9NV70 894 aa22.31■■□□□ 1.16
NSFL1C-211ENST00000555359 DMAC2Q9NW81 257 aa22.31■■□□□ 1.16
NSFL1C-211ENST00000555359 MYOFQ9NZM1 2061 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 ABCA7Q8IZY2 2146 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 HELZP42694 1942 aaKnown RBP22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 A0A1B0GVL5 298 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 SLC9A3R1O14745 358 aaPredicted RBP22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 COCHO43405 550 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 ACTN4O43707 911 aaKnown RBP22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 RHOBTB1O94844 696 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 RTN3O95197 1032 aaPredicted RBP22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 AP3M2P53677 418 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 ELF2Q15723 593 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 STPG1Q5TH74 334 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 C12orf40Q86WS4 652 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 CCDC26Q8TAB7 109 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 CHAMP1Q96JM3 812 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 PNKPQ96T60 521 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 CCSER2Q9H7U1 834 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 VRTNQ9H8Y1 702 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 ZDHHC4Q9NPG8 344 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 VPS45Q9NRW7 570 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 PCDHGA5Q9Y5G8 931 aa22.3■■□□□ 1.16
NSFL1C-211ENST00000555359 MYO16Q9Y6X6 1858 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 HNRNPLP14866 589 aaKnown RBP eCLIP22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 TIE1P35590 1138 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 SLC5A3P53794 718 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 CLDN10P78369 228 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 USP39Q53GS9 565 aaKnown RBP22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 HECTD3Q5T447 861 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 ATL3Q6DD88 541 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 ALLCQ8N6M5 410 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 PDZD8Q8NEN9 1154 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 GMIPQ9P107 970 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 EPG5Q9HCE0 2579 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 ATP8B3O60423 1300 aa22.29■■□□□ 1.16
NSFL1C-211ENST00000555359 TNFRSF10BO14763 440 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 AP1G2O75843 785 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 BEST1O76090 585 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 KAT7O95251 611 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 KLF8O95600 359 aaPredicted RBP22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 PDIA4P13667 645 aaKnown RBP22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 CCDC130P13994 396 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 PGFP49763 221 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 KDSRQ06136 332 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 SGSM1Q2NKQ1 1148 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 LY6G5CQ5SRR4 150 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 CEP135Q66GS9 1140 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 SPOPLQ6IQ16 392 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 TMEM92Q6UXU6 159 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 DDX42Q86XP3 938 aaKnown RBP eCLIP22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 FUKQ8N0W3 1084 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 NAT16Q8N8M0 369 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 TXNDC5Q8NBS9 432 aaKnown RBP22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 WBP2Q969T9 261 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 TNIP3Q96KP6 325 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 KCTD10Q9H3F6 313 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 DMAP1Q9NPF5 467 aaPredicted RBP22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 KRT82Q9NSB4 513 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 HMGXB4Q9UGU5 601 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 MMP17Q9ULZ9 603 aa22.28■■□□□ 1.16
NSFL1C-211ENST00000555359 TM4SF5O14894 197 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 CAVIN2O95810 425 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 ADH1CP00326 375 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 NR3C1P04150 777 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 APODP05090 189 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 IRF1P10914 325 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 ADH5P11766 374 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 PFKFB1P16118 471 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 LIMK1P53667 647 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 MRPS21P82921 87 aaKnown RBP22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 CRY1Q16526 586 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 SLC9A9Q8IVB4 645 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 KIAA1958Q8N8K9 716 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 C12orf29Q8N999 325 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 ZMIZ2Q8NF64 920 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 SLC2A14Q8TDB8 520 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 OVCA2Q8WZ82 227 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 SMARCD1Q96GM5 515 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 ZFRQ96KR1 1074 aaKnown RBP22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 SMOQ99835 787 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 ARHGEF4Q9NR80 690 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 IL37Q9NZH6 218 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 TBC1D14Q9P2M4 693 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 CIZ1Q9ULV3 898 aaPredicted RBP22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 SH3BP1Q9Y3L3 701 aa22.27■■□□□ 1.16
NSFL1C-211ENST00000555359 E2F8A0AVK6 867 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 BCLAF3A2AJT9 711 aaKnown RBP22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 SGK1O00141 431 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 BCKDHBP21953 392 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 NDST1P52848 882 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 MAP3K7CLP57077 242 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 ZACNQ401N2 412 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 RNF43Q68DV7 783 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 SV2AQ7L0J3 742 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 RASSF3Q86WH2 238 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 IL17RCQ8NAC3 791 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 MDGA1Q8NFP4 955 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 RLN3Q8WXF3 142 aa22.26■■□□□ 1.15
NSFL1C-211ENST00000555359 DDX1Q92499 740 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms