RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 F11P03951 625 aa15.03■□□□□ -0
CHD8-208ENST00000555301 UNGP13051 313 aaPredicted RBP15.03■□□□□ -0
CHD8-208ENST00000555301 LCP1P13796 627 aa15.03■□□□□ -0
CHD8-208ENST00000555301 FSHRP23945 695 aa15.03■□□□□ -0
CHD8-208ENST00000555301 NSFP46459 744 aaKnown RBP15.03■□□□□ -0
CHD8-208ENST00000555301 GSDMDP57764 484 aa15.03■□□□□ -0
CHD8-208ENST00000555301 NTHL1P78549 312 aa15.03■□□□□ -0
CHD8-208ENST00000555301 CENPCQ03188 943 aa15.03■□□□□ -0
CHD8-208ENST00000555301 CLEC16AQ2KHT3 1053 aa15.03■□□□□ -0
CHD8-208ENST00000555301 ARHGAP15Q53QZ3 475 aa15.03■□□□□ -0
CHD8-208ENST00000555301 PRSS36Q5K4E3 855 aa15.03■□□□□ -0
CHD8-208ENST00000555301 PM20D1Q6GTS8 502 aa15.03■□□□□ -0
CHD8-208ENST00000555301 ERICH1Q86X53 443 aa15.03■□□□□ -0
CHD8-208ENST00000555301 ARHGAP18Q8N392 663 aa15.03■□□□□ -0
CHD8-208ENST00000555301 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.03■□□□□ -0
CHD8-208ENST00000555301 FEZF2Q8TBJ5 459 aa15.03■□□□□ -0
CHD8-208ENST00000555301 CPA5Q8WXQ8 436 aa15.03■□□□□ -0
CHD8-208ENST00000555301 CPXM1Q96SM3 734 aa15.03■□□□□ -0
CHD8-208ENST00000555301 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.03■□□□□ -0
CHD8-208ENST00000555301 ULBP1Q9BZM6 244 aa15.03■□□□□ -0
CHD8-208ENST00000555301 ATXN3LQ9H3M9 355 aa15.03■□□□□ -0
CHD8-208ENST00000555301 DEF6Q9H4E7 631 aa15.03■□□□□ -0
CHD8-208ENST00000555301 ARHGAP20Q9P2F6 1191 aa15.03■□□□□ -0
CHD8-208ENST00000555301 ZMYM5Q9UJ78 669 aa15.03■□□□□ -0
CHD8-208ENST00000555301 A0A1W2PRU2 124 aa15.02■□□□□ -0
CHD8-208ENST00000555301 GRXCR2A6NFK2 248 aa15.02■□□□□ -0
CHD8-208ENST00000555301 SOBPA7XYQ1 873 aa15.02■□□□□ -0
CHD8-208ENST00000555301 E5RJQ4 531 aa15.02■□□□□ -0
CHD8-208ENST00000555301 USP17L7P0C7H9 530 aa15.02■□□□□ -0
CHD8-208ENST00000555301 GZMAP12544 262 aa15.02■□□□□ -0
CHD8-208ENST00000555301 DDX6P26196 483 aaKnown RBP eCLIP15.02■□□□□ -0
CHD8-208ENST00000555301 PSEN1P49768 467 aa15.02■□□□□ -0
CHD8-208ENST00000555301 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
CHD8-208ENST00000555301 SLC5A9Q2M3M2 681 aa15.02■□□□□ -0
CHD8-208ENST00000555301 PTPN20Q4JDL3 420 aa15.02■□□□□ -0
CHD8-208ENST00000555301 PTCRAQ6ISU1 281 aaPredicted RBP15.02■□□□□ -0
CHD8-208ENST00000555301 GAREM2Q75VX8 874 aa15.02■□□□□ -0
CHD8-208ENST00000555301 MON1AQ86VX9 555 aa15.02■□□□□ -0
CHD8-208ENST00000555301 ZDHHC17Q8IUH5 632 aa15.02■□□□□ -0
CHD8-208ENST00000555301 IRGQQ8WZA9 623 aa15.02■□□□□ -0
CHD8-208ENST00000555301 MRPS31Q92665 395 aaKnown RBP15.02■□□□□ -0
CHD8-208ENST00000555301 C18orf8Q96DM3 657 aa15.02■□□□□ -0
CHD8-208ENST00000555301 POMKQ9H5K3 350 aa15.02■□□□□ -0
CHD8-208ENST00000555301 PRDM6Q9NQX0 595 aa15.02■□□□□ -0
CHD8-208ENST00000555301 TLR8Q9NR97 1041 aaKnown RBP15.02■□□□□ -0
CHD8-208ENST00000555301 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.02■□□□□ -0
CHD8-208ENST00000555301 ADAMTS1Q9UHI8 967 aa15.02■□□□□ -0
CHD8-208ENST00000555301 CDH22Q9UJ99 828 aa15.02■□□□□ -0
CHD8-208ENST00000555301 ZNF840PA6NDX5 716 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 PIK3R2O00459 728 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 DDX3XO00571 662 aaKnown RBP eCLIP15.01□□□□□ -0.01
CHD8-208ENST00000555301 GABBR2O75899 941 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 PLEKP08567 350 aaPredicted RBP15.01□□□□□ -0.01
CHD8-208ENST00000555301 ZDHHC11BP0C7U3 371 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 MMP8P22894 467 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 EIF4A3P38919 411 aaKnown RBP15.01□□□□□ -0.01
CHD8-208ENST00000555301 CCR2P41597 374 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 GABRB2P47870 512 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 DAOAP59103 153 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 MRPS5P82675 430 aaKnown RBP15.01□□□□□ -0.01
CHD8-208ENST00000555301 SMAD2Q15796 467 aaKnown RBP15.01□□□□□ -0.01
CHD8-208ENST00000555301 SNX30Q5VWJ9 437 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 ACAD10Q6JQN1 1059 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 TMEM150AQ86TG1 271 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 PHF13Q86YI8 300 aaPredicted RBP15.01□□□□□ -0.01
CHD8-208ENST00000555301 SCUBE3Q8IX30 993 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 SLC30A5Q8TAD4 765 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 OLIG1Q8TAK6 271 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 ITFG1Q8TB96 612 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 SHKBP1Q8TBC3 707 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 GOLGA1Q92805 767 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 TCEAL4Q96EI5 215 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 CCDC42Q96M95 316 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 NHEJ1Q9H9Q4 299 aaPredicted RBP15.01□□□□□ -0.01
CHD8-208ENST00000555301 GMIPQ9P107 970 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 CHORDC1Q9UHD1 332 aaPredicted RBP15.01□□□□□ -0.01
CHD8-208ENST00000555301 STRIP2Q9ULQ0 834 aa15.01□□□□□ -0.01
CHD8-208ENST00000555301 PAPSS1O43252 624 aaPredicted RBP15□□□□□ -0.01
CHD8-208ENST00000555301 AKR1B10O60218 316 aa15□□□□□ -0.01
CHD8-208ENST00000555301 MOSPD3O75425 235 aa15□□□□□ -0.01
CHD8-208ENST00000555301 TADA3O75528 432 aa15□□□□□ -0.01
CHD8-208ENST00000555301 ERBB2P04626 1255 aa15□□□□□ -0.01
CHD8-208ENST00000555301 CALB1P05937 261 aa15□□□□□ -0.01
CHD8-208ENST00000555301 PFKLP17858 780 aa15□□□□□ -0.01
CHD8-208ENST00000555301 TUBP50607 506 aa15□□□□□ -0.01
CHD8-208ENST00000555301 TFF2Q03403 129 aa15□□□□□ -0.01
CHD8-208ENST00000555301 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
CHD8-208ENST00000555301 TEAD2Q15562 447 aa15□□□□□ -0.01
CHD8-208ENST00000555301 OR6B2Q6IFH4 312 aa15□□□□□ -0.01
CHD8-208ENST00000555301 TOGARAM2Q6ZUX3 1019 aa15□□□□□ -0.01
CHD8-208ENST00000555301 GET4Q7L5D6 327 aaPredicted RBP15□□□□□ -0.01
CHD8-208ENST00000555301 TADA2BQ86TJ2 420 aa15□□□□□ -0.01
CHD8-208ENST00000555301 TMTC1Q8IUR5 882 aa15□□□□□ -0.01
CHD8-208ENST00000555301 ATXN2LQ8WWM7 1075 aaKnown RBP15□□□□□ -0.01
CHD8-208ENST00000555301 ACSF2Q96CM8 615 aaPredicted RBP15□□□□□ -0.01
CHD8-208ENST00000555301 VCPIP1Q96JH7 1222 aa15□□□□□ -0.01
CHD8-208ENST00000555301 CHP1Q99653 195 aa15□□□□□ -0.01
CHD8-208ENST00000555301 TRIM62Q9BVG3 475 aa15□□□□□ -0.01
CHD8-208ENST00000555301 PHF7Q9BWX1 381 aaPredicted RBP15□□□□□ -0.01
CHD8-208ENST00000555301 CLIC5Q9NZA1 410 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms