RNA–Protein interactions for RNA: ENST00000555078.2

RAB42P1-201, Transcript of RAB42, member RAS oncogene family, pseudogene 1, humanhuman

BASIC

Gene RAB42P1, Length 316 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42P1-201ENST00000555078 SCAMP3O14828 347 aaKnown RBP13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 HRO43593 1189 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 RNF40O75150 1001 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 CILPO75339 1184 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 SMC2O95347 1197 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 ZDHHC11BP0C7U3 371 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 CD58P19256 250 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 OPRD1P41143 372 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 PGFP49763 221 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 MXI1P50539 228 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 NR1H3Q13133 447 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 SRSF5Q13243 272 aaKnown RBP13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 GAB4Q2WGN9 574 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 HEATR6Q6AI08 1181 aaKnown RBP13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 ANKRD40Q6AI12 368 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 CLEC20AQ6ZU45 233 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 GPRIN1Q7Z2K8 1008 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 LONP2Q86WA8 852 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 ADGRG2Q8IZP9 1017 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 KIAA1958Q8N8K9 716 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 CCDC150Q8NCX0 1101 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 CYFIP2Q96F07 1278 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 HNRNPABQ99729 332 aaKnown RBP13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 TSG101Q99816 390 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 NT5C1AQ9BXI3 368 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 CCSER2Q9H7U1 834 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 POLR3BQ9NW08 1133 aaPredicted RBP13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 CFAP97Q9P2B7 532 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 KIAA1549LQ6ZVL6 1849 aa13.23□□□□□ -0.29
RAB42P1-201ENST00000555078 SLC16A3O15427 465 aaKnown RBP13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 CYP17A1P05093 508 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 FAM200BP0CF97 657 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 HOXA6P31267 233 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 TUBP50607 506 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 LPAL2Q16609 132 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 FBXO43Q4G163 708 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 HECTD3Q5T447 861 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 WDR5BQ86VZ2 330 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 DDX42Q86XP3 938 aaKnown RBP eCLIP13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 FBXL13Q8NEE6 735 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 EXOC4Q96A65 974 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 JAKMIP2Q96AA8 810 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 RAB20Q9NX57 234 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 MYO16Q9Y6X6 1858 aa13.22□□□□□ -0.29
RAB42P1-201ENST00000555078 CFAP54Q96N23 3096 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 STX10O60499 249 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 ATG13O75143 517 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 ID4P47928 161 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 LRRC63Q05C16 580 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 SIM2Q14190 667 aaPredicted RBP13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 DHCR24Q15392 516 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 ZNF394Q53GI3 561 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 DCAF17Q5H9S7 520 aaPredicted RBP13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 PPP1R26Q5T8A7 1209 aaPredicted RBP13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 TCERG1LQ5VWI1 586 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 ISM2Q6H9L7 571 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 PRR23BQ6ZRT6 265 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 ELOA2Q8IYF1 753 aaPredicted RBP13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 RPLP0P6Q8NHW5 317 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 TATDN2Q93075 761 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 WBP2Q969T9 261 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 FAXDC2Q96IV6 333 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 ARID3AQ99856 593 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 FBXO44Q9H4M3 255 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 OSER1Q9NX31 292 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 HOOK1Q9UJC3 728 aaKnown RBP13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 MAN1B1Q9UKM7 699 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 SLC8A2Q9UPR5 921 aa13.21□□□□□ -0.29
RAB42P1-201ENST00000555078 MYH10P35580 1976 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 E2F8A0AVK6 867 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 ANTXRLA6NF34 631 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 SLC9A3R1O14745 358 aaPredicted RBP13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 CYP26A1O43174 497 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 TLR5O60602 858 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 GADD45BO75293 160 aaPredicted RBP13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 ACO1P21399 889 aaKnown RBP13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 TGM1P22735 817 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 CNR2P34972 360 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 PXNP49023 591 aaPredicted RBP13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 LAIR1Q6GTX8 287 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 RHBDF2Q6PJF5 856 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 C12orf40Q86WS4 652 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 SECISBP2LQ93073 1101 aaKnown RBP13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 RMDN1Q96DB5 314 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 GTPBP4Q9BZE4 634 aaKnown RBP13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 TLR8Q9NR97 1041 aaKnown RBP13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 CISHQ9NSE2 258 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 TBC1D14Q9P2M4 693 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 GMEB2Q9UKD1 530 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 RAB23Q9ULC3 237 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 SCML2Q9UQR0 700 aa13.2□□□□□ -0.3
RAB42P1-201ENST00000555078 COQ4Q9Y3A0 265 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms