RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 TRIM9Q9C026 710 aa16.02■□□□□ 0.16
XRCC3-210ENST00000554974 ELOVL4Q9GZR5 314 aa16.02■□□□□ 0.16
XRCC3-210ENST00000554974 TNMDQ9H2S6 317 aa16.02■□□□□ 0.16
XRCC3-210ENST00000554974 TMEM9BQ9NQ34 198 aa16.02■□□□□ 0.16
XRCC3-210ENST00000554974 AGPAT3Q9NRZ7 376 aa16.02■□□□□ 0.16
XRCC3-210ENST00000554974 EHD2Q9NZN4 543 aa16.02■□□□□ 0.16
XRCC3-210ENST00000554974 ATXN2Q99700 1313 aaKnown RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 CDX4O14627 284 aaPredicted RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 TGFB1I1O43294 461 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 TACC1O75410 805 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 TOP3BO95985 862 aaKnown RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 MBL2P11226 248 aaPredicted RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 ADH5P11766 374 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 PTPN1P18031 435 aaKnown RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 IRX4P78413 519 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 MRPS21P82921 87 aaKnown RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 CYP24A1Q07973 514 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 E2F4Q16254 413 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 WDR72Q3MJ13 1102 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 TDRD10Q5VZ19 366 aaKnown RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 RHBDF2Q6PJF5 856 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 EPM2AIP1Q7L775 607 aaPredicted RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 NELFCDQ8IXH7 590 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 OLIG1Q8TAK6 271 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 HMGB4Q8WW32 186 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 SLITRK1Q96PX8 696 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 B3GNT5Q9BYG0 378 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 GZF1Q9H116 711 aaPredicted RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 ARHGEF4Q9NR80 690 aa16.01■□□□□ 0.15
XRCC3-210ENST00000554974 NXF1Q9UBU9 619 aaKnown RBP16.01■□□□□ 0.15
XRCC3-210ENST00000554974 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 SLC9A3R1O14745 358 aaPredicted RBP16■□□□□ 0.15
XRCC3-210ENST00000554974 CLIC2O15247 247 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 EIF3DO15371 548 aaKnown RBP eCLIP16■□□□□ 0.15
XRCC3-210ENST00000554974 ADAM23O75077 832 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 ALDH1A2O94788 518 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 ADH1CP00326 375 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 APODP05090 189 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 PROS1P07225 676 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 P2RY2P41231 377 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 PTGER3P43115 390 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 KIR2DL1P43626 348 aaPredicted RBP16■□□□□ 0.15
XRCC3-210ENST00000554974 PPP3CCP48454 512 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 MYL6P60660 151 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 PSMD6Q15008 389 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 UAP1L1Q3KQV9 507 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 FAM26FQ5R3K3 315 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 LY6G5CQ5SRR4 150 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 UNQ6494/PRO21346Q6UXR6 183 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 TMEFF1Q8IYR6 380 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 B3GALNT2Q8NCR0 500 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 WHAMMQ8TF30 809 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 ELMO3Q96BJ8 720 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 DHX58Q96C10 678 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 ZFRQ96KR1 1074 aaKnown RBP16■□□□□ 0.15
XRCC3-210ENST00000554974 SMYD3Q9H7B4 428 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 KIAA1586Q9HCI6 787 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 KBTBD4Q9NVX7 518 aa16■□□□□ 0.15
XRCC3-210ENST00000554974 BCCIPQ9P287 314 aaKnown RBP eCLIP16■□□□□ 0.15
XRCC3-210ENST00000554974 MBD1Q9UIS9 605 aaPredicted RBP16■□□□□ 0.15
XRCC3-210ENST00000554974 ASCC3Q8N3C0 2202 aaKnown RBP15.99■□□□□ 0.15
XRCC3-210ENST00000554974 FAM237AA0A1B0GTK4 181 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 TCRBV21S2A2A0A5A6 115 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 A8MXQ7 604 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 COCHO43405 550 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 CMA1P23946 247 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 CASP1P29466 404 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 EIF2DP41214 584 aaKnown RBP15.99■□□□□ 0.15
XRCC3-210ENST00000554974 MAPK8P45983 427 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 CASP4P49662 377 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 TRIM61Q5EBN2 209 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 LPCAT2Q7L5N7 544 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 PHTF2Q8N3S3 785 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 DEFB124Q8NES8 71 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 SCAMP5Q8TAC9 235 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 SCFD1Q8WVM8 642 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 FBXO32Q969P5 355 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 SPACA7Q96KW9 195 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 KCNK16Q96T55 309 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 XYLT2Q9H1B5 865 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 TMEM74BQ9NUR3 256 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 WASF3Q9UPY6 502 aa15.99■□□□□ 0.15
XRCC3-210ENST00000554974 CEP192Q8TEP8 1941 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 ADAMTS9Q9P2N4 1935 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 A0A1W2PQ27 194 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 A0A1W2PQ64 194 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 A0A1W2PQD8 194 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 MAP3K13O43283 966 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 CLSTN1O94985 981 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 YWHAQP27348 245 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 GRIA2P42262 883 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 CDH8P55286 799 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 TRPC3Q13507 836 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 EOGTQ5NDL2 527 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 SCARA5Q6ZMJ2 495 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 FAM35AQ86V20 835 aa15.98■□□□□ 0.15
XRCC3-210ENST00000554974 DDX42Q86XP3 938 aaKnown RBP eCLIP15.98■□□□□ 0.15
XRCC3-210ENST00000554974 NUP93Q8N1F7 819 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms