RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 CHMP2BQ9UQN3 213 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 TXNDC9O14530 226 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 ZBED1O96006 694 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 FAM153BP0C7A2 387 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 ARSEP51690 589 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 FAM153CQ494X1 144 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.28■□□□□ 0.36
PCNX1-209ENST00000554879 PRDM5Q9NQX1 630 aaPredicted RBP17.28■□□□□ 0.36
PCNX1-209ENST00000554879 FAM105AQ9NUU6 356 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 FAM153AQ9UHL3 310 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 PMM2O15305 246 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 TADA2AO75478 443 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 PAEPP09466 180 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 RAB27AP51159 221 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 MAP3K7CLP57077 242 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 PURAQ00577 322 aaKnown RBP17.28■□□□□ 0.36
PCNX1-209ENST00000554879 BBS9Q3SYG4 887 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 PALM2Q8IXS6 379 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 LPIN3Q9BQK8 851 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 SIK2Q9H0K1 926 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 DYTNA2CJ06 578 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 PTPN20Q4JDL3 420 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 CTAGE3PQ8IX95 158 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 ARRDC4Q8NCT1 418 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 INTS9Q9NV88 658 aaKnown RBP17.28■□□□□ 0.36
PCNX1-209ENST00000554879 PAIP2BQ9ULR5 123 aaKnown RBP17.28■□□□□ 0.36
PCNX1-209ENST00000554879 TLL2Q9Y6L7 1015 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 SLC4A7Q9Y6M7 1214 aa17.28■□□□□ 0.36
PCNX1-209ENST00000554879 HMGB1P1B2RPK0 211 aaPredicted RBP17.27■□□□□ 0.36
PCNX1-209ENST00000554879 ADCY6O43306 1168 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 KRT15P19012 456 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 GRIK3Q13003 919 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 ZC3H12AQ5D1E8 599 aaKnown RBP17.27■□□□□ 0.36
PCNX1-209ENST00000554879 CFAP157Q5JU67 520 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 MORN1Q5T089 497 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 MFN1Q8IWA4 741 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 VCPIP1Q96JH7 1222 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 TWNKQ96RR1 684 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 PLEKHA5Q9HAU0 1116 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 NR2E1Q9Y466 385 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 MCM3APO60318 1980 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 TAS2R40P59535 323 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 C15orf59Q2T9L4 293 aaPredicted RBP17.27■□□□□ 0.36
PCNX1-209ENST00000554879 ANKRD20A8PQ5CZ79 823 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 PPP1R26Q5T8A7 1209 aaPredicted RBP17.27■□□□□ 0.36
PCNX1-209ENST00000554879 SCARA3Q6AZY7 606 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 MFSD7Q6UXD7 560 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 CPXM1Q96SM3 734 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 RNF208Q9H0X6 261 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 RSAD1Q9HA92 442 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 MLXIPLQ9NP71 852 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 KIAA1257Q9ULG3 409 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 MAD1L1Q9Y6D9 718 aa17.27■□□□□ 0.36
PCNX1-209ENST00000554879 SUPT3HO75486 399 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 FAM200BP0CF97 657 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 SULT1E1P49888 294 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 TFDP2Q14188 446 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 SH2D4BQ5SQS7 431 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 IZUMO3Q5VZ72 239 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 GDF6Q6KF10 455 aaPredicted RBP17.27■□□□□ 0.35
PCNX1-209ENST00000554879 DEFB128Q7Z7B8 93 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 NT5DC4Q86YG4 428 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 CEP70Q8NHQ1 597 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 AGAP11Q8TF27 550 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 SENP8Q96LD8 212 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 SIX4Q9UIU6 781 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 STK10O94804 968 aaKnown RBP17.27■□□□□ 0.35
PCNX1-209ENST00000554879 GRIK1P39086 918 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 JOSD2Q8TAC2 188 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 MDM1Q8TC05 714 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 KDM4CQ9H3R0 1056 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 ECT2Q9H8V3 914 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 PRM3Q9NNZ6 103 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 TJP2Q9UDY2 1190 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 PADI3Q9ULW8 664 aa17.27■□□□□ 0.35
PCNX1-209ENST00000554879 ATAD5Q96QE3 1844 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 MOCS2O96007 188 aaPredicted RBP17.26■□□□□ 0.35
PCNX1-209ENST00000554879 MMP8P22894 467 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 MSH2P43246 934 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 ASPAP45381 313 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 AARSP49588 968 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCNX1-209ENST00000554879 BYSLQ13895 437 aaKnown RBP17.26■□□□□ 0.35
PCNX1-209ENST00000554879 C9orf57Q5W0N0 161 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 RWDD4Q6NW29 188 aaKnown RBP17.26■□□□□ 0.35
PCNX1-209ENST00000554879 FBXO25Q8TCJ0 367 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 FAM172AQ8WUF8 416 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 STMN4Q9H169 189 aaPredicted RBP17.26■□□□□ 0.35
PCNX1-209ENST00000554879 SAYSD1Q9NPB0 183 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 CHST7Q9NS84 486 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 STAP1Q9ULZ2 295 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 TCRBV7S2A1N4TA0A589 114 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 HMGCRP04035 888 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 CPB1P15086 417 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 EIF3EP60228 445 aaKnown RBP17.26■□□□□ 0.35
PCNX1-209ENST00000554879 ROR2Q01974 943 aaKnown RBP17.26■□□□□ 0.35
PCNX1-209ENST00000554879 KLC1Q07866 573 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 CNGA2Q16280 664 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 RNF139Q8WU17 664 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 SAE1Q9UBE0 346 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms