RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 IREB2P48200 963 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 CDC42EP1Q00587 391 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 SLC1A5Q15758 541 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 CNGA3Q16281 694 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 LRRC36Q1X8D7 754 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 SYCP2LQ5T4T6 812 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 SESTD1Q86VW0 696 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.04□□□□□ -1.76
KTN1-217ENST00000554831 SLC35B2Q8TB61 432 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 ELMO3Q96BJ8 720 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 ZNF669Q96BR6 464 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 ZNF184Q99676 751 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 TRIM56Q9BRZ2 755 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 MED10Q9BTT4 135 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 TMEM120AQ9BXJ8 343 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 ILKAPQ9H0C8 392 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 DHX33Q9H6R0 707 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 SAE1Q9UBE0 346 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 IPO11Q9UI26 975 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 CORO1CQ9ULV4 474 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 ARHGEF37A1IGU5 675 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 PIK3R2O00459 728 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 DHX15O43143 795 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 LRCH4O75427 683 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 SKAP2O75563 359 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 CYP1A1P04798 512 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 TCF7P36402 384 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 FDFT1P37268 417 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 PTDSS1P48651 473 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 CDH8P55286 799 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 OCRLQ01968 901 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 BLMHQ13867 455 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 TEDDM1Q5T9Z0 273 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 EFCAB12Q6NXP0 572 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 KYAT3Q6YP21 454 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 RGS9BPQ6ZS82 235 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 GSDMBQ8TAX9 411 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 UBA3Q8TBC4 463 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 PLEKHO2Q8TD55 490 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 PPP2R3CQ969Q6 453 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 RMDN2Q96LZ7 410 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 AGAP3Q96P47 875 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 EBF2Q9HAK2 575 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 SSU72Q9NP77 194 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 CHKBQ9Y259 395 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 ADGRA3Q8IWK6 1321 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 CCDC195A0A1B0GUA6 201 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 A0A1W2PPM1 405 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 TCRBV9S1A1TA0A576 114 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 C3orf70A6NLC5 250 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 PFDN1O60925 122 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 CRCPO75575 148 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 TRPA1O75762 1119 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 APOA4P06727 396 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 FOXN2P32314 431 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 GP5P40197 560 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 GCLCP48506 637 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 MGAT5Q09328 741 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.04□□□□□ -1.76
KTN1-217ENST00000554831 KLC3Q6P597 504 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 RELL1Q8IUW5 271 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 MICALL2Q8IY33 904 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 ACMSDQ8TDX5 336 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 CD101Q93033 1021 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 OXNAD1Q96HP4 312 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 FAM84AQ96KN4 292 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 RNF157Q96PX1 679 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 DRC3Q9H069 523 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 LRRC40Q9H9A6 602 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 FAM49BQ9NUQ9 324 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 GGA3Q9NZ52 723 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 ZNF212Q9UDV6 495 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 DCDC2Q9UHG0 476 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 TAGLN3Q9UI15 199 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 MCM8Q9UJA3 840 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 BARX2Q9UMQ3 279 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 FAF1Q9UNN5 650 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 NUP98P52948 1817 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 MYH3P11055 1940 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 TIMM44O43615 452 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 ATP9BO43861 1147 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 WFS1O76024 890 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 TGDSO95455 350 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 C4BPAP04003 597 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 MYCNP04198 464 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 RALBP11234 206 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 PAX7P23759 505 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 CDKN2BP42772 138 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 CLCN3P51790 818 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 TPD52P55327 224 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 NBPF12Q5TAG4 269 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 RNASEH2BQ5TBB1 312 aaKnown RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 MON1BQ7L1V2 547 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 SAMD7Q7Z3H4 446 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 CYP4X1Q8N118 509 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 FAM172AQ8WUF8 416 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 SPOCK2Q92563 424 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 EPAS1Q99814 870 aa4.04□□□□□ -1.76
KTN1-217ENST00000554831 DENND2DQ9H6A0 471 aaPredicted RBP4.04□□□□□ -1.76
KTN1-217ENST00000554831 ARMCX1Q9P291 453 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms