RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 DLL3Q9NYJ7 618 aa5.53□□□□□ -1.52
ATXN3-228ENST00000554592 RTEL1Q9NZ71 1219 aa5.53□□□□□ -1.52
ATXN3-228ENST00000554592 TUBE1Q9UJT0 475 aa5.53□□□□□ -1.52
ATXN3-228ENST00000554592 ZKSCAN5Q9Y2L8 839 aa5.53□□□□□ -1.52
ATXN3-228ENST00000554592 TRPV2Q9Y5S1 764 aa5.53□□□□□ -1.52
ATXN3-228ENST00000554592 TANC1Q9C0D5 1861 aa5.53□□□□□ -1.52
ATXN3-228ENST00000554592 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
ATXN3-228ENST00000554592 TRIP12Q14669 1992 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-228ENST00000554592 PTPRSQ13332 1948 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 ZMYM6O95789 1325 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 IGSF9BQ9UPX0 1349 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 GSTTP1A0A1W2PQM5 241 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 HIDE1A8MVS5 230 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 KLRF2D3W0D1 207 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 MAN2B1O00754 1011 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 ZNF213O14771 459 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 HGSO14964 777 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-228ENST00000554592 CENPBP07199 599 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-228ENST00000554592 INSRRP14616 1297 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 MX1P20591 662 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 TCF7P36402 384 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-228ENST00000554592 GUCY2FP51841 1108 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 IL2P60568 153 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 SP4Q02446 784 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 TDGQ13569 410 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 SART3Q15020 963 aaKnown RBP5.52□□□□□ -1.53
ATXN3-228ENST00000554592 ARHGAP44Q17R89 818 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 FAM102BQ5T8I3 360 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 PLPP4Q5VZY2 271 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 STEAP3Q658P3 488 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 FERMT3Q86UX7 667 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 TBC1D10CQ8IV04 446 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 COLGALT1Q8NBJ5 622 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 UHMK1Q8TAS1 419 aaKnown RBP5.52□□□□□ -1.53
ATXN3-228ENST00000554592 CYP2W1Q8TAV3 490 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 RUBCNQ92622 972 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 BORCS6Q96GS4 357 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 CDHR1Q96JP9 859 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 FAM49AQ9H0Q0 323 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-228ENST00000554592 SMOC2Q9H3U7 446 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 CWH43Q9H720 699 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 ATP6V0A4Q9HBG4 840 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 RGS18Q9NS28 235 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 SPTLC3Q9NUV7 552 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 H2AFY2Q9P0M6 372 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-228ENST00000554592 DSEQ9UL01 958 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 WASF3Q9UPY6 502 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 TELO2Q9Y4R8 837 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 MYH8P13535 1937 aa5.52□□□□□ -1.53
ATXN3-228ENST00000554592 KDM3AQ9Y4C1 1321 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 SMIM35A0A1B0GVV1 85 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 SLC12A8A0AV02 714 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 DENND3A2RUS2 1198 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 ALG1L2C9J202 215 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 KRIT1O00522 736 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 MAFGO15525 162 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 ATP9AO75110 1047 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 CLASP2O75122 1294 aaKnown RBP5.51□□□□□ -1.53
ATXN3-228ENST00000554592 RPS6KA5O75582 802 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 FKBP9O95302 570 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 CXCL14O95715 111 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 MARK3P27448 753 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 PPM1AP35813 382 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 LSSP48449 732 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 ITGA1P56199 1179 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 SMC1AQ14683 1233 aaKnown RBP5.51□□□□□ -1.53
ATXN3-228ENST00000554592 TMEM266Q2M3C6 531 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 PRR31Q5SQ13 230 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 RNF219Q5W0B1 726 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-228ENST00000554592 KIAA1841Q6NSI8 718 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 CD300LDQ6UXZ3 194 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 FKBP9P1Q75LS8 142 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 NOSTRINQ8IVI9 506 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 RBM12BQ8IXT5 1001 aaKnown RBP5.51□□□□□ -1.53
ATXN3-228ENST00000554592 CARFQ8N187 725 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 ENAHQ8N8S7 591 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-228ENST00000554592 OTUD7AQ8TE49 926 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-228ENST00000554592 ZBTB8AQ96BR9 441 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 FAM227BQ96M60 508 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 ZNF558Q96NG5 402 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 PIGSQ96S52 555 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 ADAM2Q99965 735 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 CD244Q9BZW8 370 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 TMEM117Q9H0C3 514 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 RIOX1Q9H6W3 641 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 ELAC1Q9H777 363 aaKnown RBP5.51□□□□□ -1.53
ATXN3-228ENST00000554592 ERVK-5Q9HDB9 667 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 EMC7Q9NPA0 242 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 OXSMQ9NWU1 459 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 TMEM161AQ9NX61 479 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 SPG21Q9NZD8 308 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 IGSF9Q9P2J2 1179 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 WNT16Q9UBV4 365 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 CDH22Q9UJ99 828 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 SRPK3Q9UPE1 567 aa5.51□□□□□ -1.53
ATXN3-228ENST00000554592 NOC2LQ9Y3T9 749 aaKnown RBP5.51□□□□□ -1.53
ATXN3-228ENST00000554592 R4GN57 208 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms