RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 SCAPQ12770 1279 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 SMARCB1Q12824 385 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 COL28A1Q2UY09 1125 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 C10orf76Q5T2E6 689 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 RRAGBQ5VZM2 374 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 EGFLAMQ63HQ2 1017 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 ARL6IP4Q66PJ3 421 aaKnown RBP7.14□□□□□ -1.27
PCNX4-208ENST00000554534 SCARA5Q6ZMJ2 495 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 TPGS1Q6ZTW0 290 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 SV2BQ7L1I2 683 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 PIP4P1Q86T03 277 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 SLCO6A1Q86UG4 719 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 SYT12Q8IV01 421 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 RGL4Q8IZJ4 473 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 PHTF2Q8N3S3 785 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 MINDY1Q8N5J2 469 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 TOP6BLQ8N6T0 577 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 TRIML1Q8N9V2 468 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 MDM1Q8TC05 714 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 SPATA18Q8TC71 538 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 CACTINQ8WUQ7 758 aaKnown RBP7.14□□□□□ -1.27
PCNX4-208ENST00000554534 ZNF516Q92618 1163 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 P2RY11Q96G91 374 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 MED10Q9BTT4 135 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 SNX25Q9H3E2 840 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 SLC32A1Q9H598 525 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 IL21RQ9HBE5 538 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 PANK4Q9NVE7 773 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 INTS13Q9NVM9 706 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 GDAP2Q9NXN4 497 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 PLK2Q9NYY3 685 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 CALCOCO1Q9P1Z2 691 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 NXF1Q9UBU9 619 aaKnown RBP7.14□□□□□ -1.27
PCNX4-208ENST00000554534 SMC3Q9UQE7 1217 aa7.14□□□□□ -1.27
PCNX4-208ENST00000554534 A8MXQ7 604 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 PRRT4C9JH25 899 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 TNFRSF10BO14763 440 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 COCHO43405 550 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 TULP3O75386 442 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 BEST1O76090 585 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 TNNC2P02585 160 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 NEFLP07196 543 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 PCSK1P29120 753 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 LONP1P36776 959 aaKnown RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 PNPLA4P41247 253 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 GRIA2P42262 883 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 CLDN6P56747 220 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 MYL6P60660 151 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SLC7A9P82251 487 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 MRPS21P82921 87 aaKnown RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 GFPT1Q06210 699 aaPredicted RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 ZNF33AQ06730 810 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SEMA3BQ13214 749 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 POSTNQ15063 836 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 CFAP221Q4G0U5 840 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SOWAHCQ53LP3 525 aaPredicted RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 EOGTQ5NDL2 527 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 FOXD4L5Q5VV16 416 aaPredicted RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 TDRD10Q5VZ19 366 aaKnown RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SLC23A3Q6PIS1 610 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 C4orf50Q6ZRC1 276 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 DPH6Q7L8W6 267 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 TRAPPC11Q7Z392 1133 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 NELFCDQ8IXH7 590 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 TMEM86AQ8N2M4 240 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 GPD1LQ8N335 351 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 HDDC3Q8N4P3 179 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 ZNF513Q8N8E2 541 aaPredicted RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 MYCBPAPQ8TBZ2 947 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 WHAMMQ8TF30 809 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 LEO1Q8WVC0 666 aaPredicted RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 FOXD4L4Q8WXT5 416 aaPredicted RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 FBXO32Q969P5 355 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 ANKRD36BP1Q96IX9 119 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 ZFRQ96KR1 1074 aaKnown RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SPACA7Q96KW9 195 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SPATA17Q96L03 361 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 AK8Q96MA6 479 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 HSPA12BQ96MM6 686 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 BBC3Q96PG8 261 aaPredicted RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SDCBP2Q9H190 292 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 MIR1-1HGQ9H1L0 117 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 ST6GALNAC4Q9H4F1 302 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SMYD3Q9H7B4 428 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 ABCB6Q9NP58 842 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 POLMQ9NP87 494 aaPredicted RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 CACNA2D2Q9NY47 1150 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 GMIPQ9P107 970 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 FBXO2Q9UK22 296 aaPredicted RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 ITGA11Q9UKX5 1188 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 CDH9Q9ULB4 789 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SLC6A14Q9UN76 642 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 MSRB2Q9Y3D2 182 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 R3HCC1Q9Y3T6 440 aaKnown RBP7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SLCO1B1Q9Y6L6 691 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 PTPRBP23467 1997 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 PCDH15Q96QU1 1955 aa7.13□□□□□ -1.27
PCNX4-208ENST00000554534 SMG1Q96Q15 3661 aaKnown RBP7.12□□□□□ -1.27
PCNX4-208ENST00000554534 IGHV1OR15-9A0A0B4J2B8 117 aa7.12□□□□□ -1.27
PCNX4-208ENST00000554534 A0A1W2PQF6 199 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms