RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SLC4A11Q8NBS3 891 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 SCAMP5Q8TAC9 235 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 SH3RF2Q8TEC5 729 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 OSCP1Q8WVF1 389 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 ATOH1Q92858 354 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-211ENST00000554310 TATDN2Q93075 761 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 TMEM176AQ96HP8 235 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 NT5C1BQ96P26 610 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 SRRTQ9BXP5 876 aaKnown RBP13.81□□□□□ -0.2
SHMT2-211ENST00000554310 HPS4Q9NQG7 708 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 GKN1Q9NS71 199 aa13.81□□□□□ -0.2
SHMT2-211ENST00000554310 NDRG2Q9UN36 371 aaKnown RBP13.81□□□□□ -0.2
SHMT2-211ENST00000554310 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.81□□□□□ -0.2
SHMT2-211ENST00000554310 ZFHX2Q9C0A1 2572 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-211ENST00000554310 ABL1P00519 1130 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 AFPP02771 609 aaKnown RBP13.8□□□□□ -0.2
SHMT2-211ENST00000554310 ZDHHC11BP0C7U3 371 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 IFNAR2P48551 515 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 RAD23BP54727 409 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 AMPD2Q01433 879 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 LRMPQ12912 555 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 RUNX3Q13761 415 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 LRRC32Q14392 662 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 PPP1R26Q5T8A7 1209 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-211ENST00000554310 ARHGAP17Q68EM7 881 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 DDX42Q86XP3 938 aaKnown RBP eCLIP13.8□□□□□ -0.2
SHMT2-211ENST00000554310 CPA6Q8N4T0 437 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 UBR7Q8N806 425 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 ATP2A3Q93084 1043 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 HEXIM2Q96MH2 286 aaKnown RBP13.8□□□□□ -0.2
SHMT2-211ENST00000554310 DUSP16Q9BY84 665 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 CHRDQ9H2X0 955 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 EBF3Q9H4W6 596 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 SPATA6Q9NWH7 488 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-211ENST00000554310 DUS2Q9NX74 493 aaKnown RBP13.8□□□□□ -0.2
SHMT2-211ENST00000554310 GMIPQ9P107 970 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 FANCMQ8IYD8 2048 aa13.8□□□□□ -0.2
SHMT2-211ENST00000554310 RIF1Q5UIP0 2472 aaKnown RBP13.79□□□□□ -0.2
SHMT2-211ENST00000554310 HHLA1C9JL84 531 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 LEFTY2O00292 366 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 CAVIN2O95810 425 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-211ENST00000554310 NBL1P41271 181 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 SLC8A3P57103 927 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 TYRO3Q06418 890 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 KCNH2Q12809 1159 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 FZD5Q13467 585 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 HS1BP3Q53T59 392 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 HECTD3Q5T447 861 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 TRIM68Q6AZZ1 485 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 GPRIN1Q7Z2K8 1008 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 TTC16Q8NEE8 873 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 TTC8Q8TAM2 541 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 JAKMIP2Q96AA8 810 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 TRIM44Q96DX7 344 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-211ENST00000554310 CNOT6LQ96LI5 555 aaKnown RBP13.79□□□□□ -0.2
SHMT2-211ENST00000554310 RNF38Q9H0F5 515 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 TLR8Q9NR97 1041 aaKnown RBP13.79□□□□□ -0.2
SHMT2-211ENST00000554310 FAM86C1Q9NVL1 165 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 SCML2Q9UQR0 700 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 CPQQ9Y646 472 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 WNT6Q9Y6F9 365 aa13.79□□□□□ -0.2
SHMT2-211ENST00000554310 LAMTOR5O43504 91 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 MBL2P11226 248 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-211ENST00000554310 CHRNB1P11230 501 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 ARSAP15289 507 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 ACO1P21399 889 aaKnown RBP13.78□□□□□ -0.2
SHMT2-211ENST00000554310 ERCC5P28715 1186 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-211ENST00000554310 GCNT1Q02742 428 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 EML3Q32P44 896 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 DPCR1Q3MIW9 517 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 SGO2Q562F6 1265 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 DGKKQ5KSL6 1271 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 TXNDC11Q6PKC3 985 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 SASS6Q6UVJ0 657 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 ANKRD52Q8NB46 1076 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 LMO3Q8TAP4 145 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 EXOC4Q96A65 974 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 MED15Q96RN5 788 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 PRMT8Q9NR22 394 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-211ENST00000554310 FBXO4Q9UKT5 387 aa13.78□□□□□ -0.2
SHMT2-211ENST00000554310 PROB1E7EW31 1015 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 SLC9A3R1O14745 358 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-211ENST00000554310 CYP26A1O43174 497 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 COCHO43405 550 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 TLR5O60602 858 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 NFATC1O95644 943 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 PAEPP09466 180 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 CD19P15391 556 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 PSEN1P49768 467 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 KIF11P52732 1056 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 BCAT1P54687 386 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 ZXDBP98169 803 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 CCINQ13939 588 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 PON2Q15165 354 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 TPD52L1Q16890 204 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms