RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 L2HGDHQ9H9P8 463 aa8.03□□□□□ -1.12
TDP1-209ENST00000554180 NGRNQ9NPE2 291 aaKnown RBP8.03□□□□□ -1.12
TDP1-209ENST00000554180 TLR9Q9NR96 1032 aa8.03□□□□□ -1.12
TDP1-209ENST00000554180 TMEM51Q9NW97 253 aa8.03□□□□□ -1.12
TDP1-209ENST00000554180 RRN3Q9NYV6 651 aa8.03□□□□□ -1.12
TDP1-209ENST00000554180 IL37Q9NZH6 218 aa8.03□□□□□ -1.12
TDP1-209ENST00000554180 EHD2Q9NZN4 543 aa8.03□□□□□ -1.12
TDP1-209ENST00000554180 SNX12Q9UMY4 172 aa8.03□□□□□ -1.12
TDP1-209ENST00000554180 SAR1BQ9Y6B6 198 aa8.03□□□□□ -1.12
TDP1-209ENST00000554180 RANBP2P49792 3224 aaKnown RBP8.02□□□□□ -1.13
TDP1-209ENST00000554180 PTPRDP23468 1912 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 KIAA1671Q9BY89 1806 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 C2CD2LO14523 706 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 ENC1O14682 589 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 TEX28O15482 410 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 ADAM12O43184 909 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 ADH1AP07327 375 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 CA3P07451 260 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 PDGFRAP16234 1089 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 RPL17P18621 184 aaKnown RBP8.02□□□□□ -1.13
TDP1-209ENST00000554180 GPD1P21695 349 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 COMTP21964 271 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 PSMA2P25787 234 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 SDC4P31431 198 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 CTNNA1P35221 906 aaKnown RBP8.02□□□□□ -1.13
TDP1-209ENST00000554180 PCK1P35558 622 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 FLT3P36888 993 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 MATKP42679 507 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 RABGGTBP53611 331 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 ARPP19P56211 112 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 ERVK-21P61565 698 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 YWHAZP63104 245 aaKnown RBP8.02□□□□□ -1.13
TDP1-209ENST00000554180 OGDHQ02218 1023 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 ZNF252P-AS1Q0IIN9 211 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 SMC1AQ14683 1233 aaKnown RBP8.02□□□□□ -1.13
TDP1-209ENST00000554180 CLUL1Q15846 466 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 MGAT5BQ3V5L5 792 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 FAM109BQ6ICB4 259 aaPredicted RBP8.02□□□□□ -1.13
TDP1-209ENST00000554180 DENND5BQ6ZUT9 1274 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 RTL10Q7L3V2 364 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 TMC7Q7Z402 723 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 POLNQ7Z5Q5 900 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 PHLDB2Q86SQ0 1253 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 SCN4BQ8IWT1 228 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 TCEAL8Q8IYN2 117 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 NUP93Q8N1F7 819 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 ARHGAP18Q8N392 663 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 JOSD2Q8TAC2 188 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 SPPL3Q8TCT6 385 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 KHSRPQ92945 711 aaKnown RBP eCLIP8.02□□□□□ -1.13
TDP1-209ENST00000554180 NT5C3BQ969T7 300 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 FAM149B1Q96BN6 582 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 BTBD6Q96KE9 485 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 PGLYRP2Q96PD5 576 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 SLC2A13Q96QE2 648 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 DDX23Q9BUQ8 820 aaKnown RBP8.02□□□□□ -1.13
TDP1-209ENST00000554180 EMILIN2Q9BXX0 1053 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 ULBP1Q9BZM6 244 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 TRIM7Q9C029 511 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 CARD9Q9H257 536 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 GOLPH3Q9H4A6 298 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 POPDC2Q9HBU9 364 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 RNF14Q9UBS8 474 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 CDC23Q9UJX2 597 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 STAP1Q9ULZ2 295 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.02□□□□□ -1.13
TDP1-209ENST00000554180 MRFAP1Q9Y605 127 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 NLRC5Q86WI3 1866 aa8.02□□□□□ -1.13
TDP1-209ENST00000554180 PATJQ8NI35 1801 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 PDE4DIPQ5VU43 2346 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.01□□□□□ -1.13
TDP1-209ENST00000554180 C2orf71A6NGG8 1288 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 TMEM110-MUSTN1A8MSY1 372 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 H0YGN5 161 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 H3BNC9 293 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 PIK3R2O00459 728 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 FSCN2O14926 492 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 LPXNO60711 386 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 LRCH4O75427 683 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 RNF8O76064 485 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 URI1O94763 535 aaPredicted RBP8.01□□□□□ -1.13
TDP1-209ENST00000554180 GJB6O95452 261 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 LTFP02788 710 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 KRT7P08729 469 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 CNPP09543 421 aaKnown RBP8.01□□□□□ -1.13
TDP1-209ENST00000554180 USP17L7P0C7H9 530 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 ATF6P18850 670 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 DNAJB2P25686 324 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 ELF1P32519 619 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 NOS2P35228 1153 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 PSEN1P49768 467 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 DUSP4Q13115 394 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 PLD1Q13393 1074 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 DDR2Q16832 855 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 HADHQ16836 314 aaKnown RBP8.01□□□□□ -1.13
TDP1-209ENST00000554180 WHAMMP3Q1A5X7 153 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 SLC25A52Q3SY17 297 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 STRADAQ7RTN6 431 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 BHLHA9Q7RTU4 235 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 MON1AQ86VX9 555 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms